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Updated: Aug 5, 2025

Guided Protocol for Fecal Microbial Characterization by 16S rRNA-Amplicon Sequencing
Published on: March 19, 2018
Variation in stool testing for children with acute gastrointestinal infections
Jessica L Markham1,2, Matt Hall1,3, Megan E Collins1
1Department of Pediatrics, Children's Mercy Kansas City, University of Missouri-Kansas City School of Medicine, Kansas City, Missouri, USA.
Pediatric gastrointestinal infection care shows wide variation in stool testing practices. Despite differences in testing, outcomes like length of stay and costs remained similar across hospitals.
Area of Science:
- Pediatric Gastroenterology
- Clinical Diagnostics
- Healthcare Quality Improvement
Background:
- Acute gastrointestinal infections are common in children, necessitating acute care.
- Variations in diagnostic testing practices can impact healthcare resource utilization and patient outcomes.
Purpose of the Study:
- To describe variations in stool testing patterns among children's hospitals.
- To determine if stool testing variations are associated with utilization outcomes such as length of stay, costs, and revisit rates.
Main Methods:
- Multicenter, cross-sectional study using the Pediatric Health Information System (PHIS) database.
- Analysis of stool testing (multiplex PCR, stool culture, ova and parasite, C. difficile) in children with acute gastrointestinal infections.
- Stratification of hospitals into low, moderate, and high testing groups; generalized estimating equations used to assess outcome associations.
Main Results:
- Over 498,000 ED-only and 40,000 hospitalized encounters analyzed from 2016-2020.
- Stool testing was more frequent in hospitalized children (1.5%-13.8%) compared to ED-only encounters (0.1%-2.3%).
- Significant variation in testing rates observed across hospitals, with no statistically significant differences in length of stay, costs, or revisit rates among testing groups.
Conclusions:
- Substantial variation exists in stool testing for pediatric gastrointestinal infections within and across hospitals.
- Current variations in stool testing did not correlate with significant differences in key utilization outcomes.
- Findings emphasize the need for standardized guidelines to improve diagnostic stewardship in pediatric care.
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