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Updated: Aug 5, 2025

Oncogene Expression Analysis with Alterations in pH in a Pancreatic Ductal Cell Line
Published on: April 11, 2025
Ornithine aminotransferase supports polyamine synthesis in pancreatic cancer
Min-Sik Lee1,2,3, Courtney Dennis4, Insia Naqvi1,3
1Division of Endocrinology, Boston Children's Hospital, Boston, MA, USA.
Abstract:
There is a need to develop effective therapies for pancreatic ductal adenocarcinoma (PDA), a highly lethal malignancy with increasing incidence1 and poor prognosis2. Although targeting tumour metabolism has been the focus of intense investigation for more than a decade, tumour metabolic plasticity and high risk of toxicity have limited this anticancer strategy3,4. Here we use genetic and pharmacological approaches in human and mouse in vitro and in vivo models to show that PDA has a distinct dependence on de novo ornithine synthesis from glutamine. We find that this process, which is mediated through ornithine aminotransferase (OAT), supports polyamine synthesis and is required for tumour growth. This directional OAT activity is usually largely restricted to infancy and contrasts with the reliance of most adult normal tissues and other cancer types on arginine-derived ornithine for polyamine synthesis5,6. This dependency associates with arginine depletion in the PDA tumour microenvironment and is driven by mutant KRAS. Activated KRAS induces the expression of OAT and polyamine synthesis enzymes, leading to alterations in the transcriptome and open chromatin landscape in PDA tumour cells. The distinct dependence of PDA, but not normal tissue, on OAT-mediated de novo ornithine synthesis provides an attractive therapeutic window for treating patients with pancreatic cancer with minimal toxicity.
Insights
Pancreatic cancer cells uniquely synthesize ornithine from glutamine, unlike normal tissues. This discovery offers a potential new therapeutic target for pancreatic ductal adenocarcinoma with reduced toxicity.
Area of Science:
- Oncology
- Cancer Metabolism
- Biochemistry
Background:
- Pancreatic ductal adenocarcinoma (PDA) is a lethal cancer with poor prognosis.
- Targeting tumor metabolism is a strategy, but faces challenges like plasticity and toxicity.
- Effective therapies for PDA are urgently needed.
Purpose of the Study:
- To investigate the metabolic dependencies of PDA.
- To identify novel therapeutic targets for pancreatic cancer.
- To explore the role of de novo ornithine synthesis in PDA.
Main Methods:
- Utilized genetic and pharmacological approaches.
- Conducted studies in human and mouse in vitro and in vivo models.
- Analyzed gene expression, epigenetics, and metabolic pathways.
Main Results:
- PDA exhibits a distinct dependence on de novo ornithine synthesis from glutamine via ornithine aminotransferase (OAT).
- This pathway supports polyamine synthesis essential for PDA tumor growth.
- Mutant KRAS drives OAT expression and alters the tumor cell transcriptome and epigenome.
- This dependency is specific to PDA, contrasting with normal adult tissues.
Conclusions:
- PDA uniquely relies on OAT-mediated de novo ornithine synthesis for polyamine production.
- This metabolic vulnerability presents a potential therapeutic window for pancreatic cancer treatment.
- Targeting OAT could offer a strategy for pancreatic cancer therapy with minimal toxicity.
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