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Widespread RNA hypoediting in schizophrenia and its relevance to mitochondrial function
Mudra Choudhury1, Ting Fu2, Kofi Amoah1
1Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, USA.
Science Advances
|April 7, 2023
Summary
Schizophrenia (SCZ) shows reduced RNA editing, particularly in European descent patients. This hypoediting links to mitochondrial dysfunction and apoptosis, impacting genes like MFN1.
Area of Science:
- Genetics
- Neuroscience
- Molecular Biology
Background:
- RNA editing alterations are observed in neurological genes in schizophrenia (SCZ).
- The global profile and molecular functions of RNA editing in SCZ are not fully understood.
Purpose of the Study:
- To analyze the global RNA editing profile in postmortem brains of SCZ patients.
- To identify SCZ-associated RNA editing sites and their molecular functions, particularly their link to mitochondrial processes.
Main Methods:
- Analysis of RNA editing in four SCZ cohorts using postmortem brain tissue.
- Weighted Gene Co-expression Network Analysis (WGCNA) to identify disease-associated editing sites.
- Massively parallel reporter assays and bioinformatic analyses to assess the impact of 3'UTR editing on gene expression.
- Functional characterization of recoding sites in the mitofusin 1 (MFN1) gene.
Main Results:
- A significant and reproducible trend of RNA hypoediting was observed in SCZ patients of European descent.
- A set of SCZ-associated editing sites was identified, shared across cohorts.
- Differential 3' untranslated region (3'UTR) editing sites influencing host gene expression were enriched for mitochondrial processes.
- Two recoding sites in MFN1 were characterized, demonstrating functional relevance to mitochondrial fusion and cellular apoptosis.
Conclusions:
- Schizophrenia is associated with a global reduction in RNA editing.
- RNA editing plays a role in mitochondrial function and cellular apoptosis in SCZ.
- Altered RNA editing, particularly hypoediting, represents a significant molecular mechanism in schizophrenia.
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