Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

RNA Editing02:23

RNA Editing

9.1K
RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
9.1K
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

959
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
959
RNA Stability01:53

RNA Stability

33.7K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
33.7K
ATP Synthase: Mechanism01:48

ATP Synthase: Mechanism

14.8K
In animals, the mitochondrial F1F0 ATP synthase is the key protein that synthesizes ATP molecules through a complex catalytic mechanism. While the nuclear genome encodes the majority of ATP synthase subunits, the mitochondrial genome encodes some of the enzyme's most critical components. The formation of this multi-subunit enzyme is a complex multi-step process regulated at the level of transcription, translation, and assembly. Defects in one or more of these steps can result in decreased...
14.8K
Riboswitches01:56

Riboswitches

8.2K
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
8.2K
Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

22.9K
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
22.9K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A Reactive (1)O2 - Responsive Combined Treatment System of Photodynamic and Chemotherapy for Cancer.

Scientific reports·2016
Same author

Single-shot absolute 3D shape measurement with Fourier transform profilometry.

Applied optics·2016
Same author

High-resolution, real-time simultaneous 3D surface geometry and temperature measurement.

Optics express·2016
Same author

Enhanced two-frequency phase-shifting method.

Applied optics·2016
Same author

Opacity proteins of neisseria gonorrhoeae in lipooligosaccharide mutants lost ability to interact with neutrophil-restricted CEACAM3 (CD66d).

Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban·2016
Same author

Important role of N108 residue in binding of bovine foamy virus transactivator Tas to viral promoters.

Virology journal·2016

Related Experiment Video

Updated: Aug 3, 2025

Author Spotlight: Advancing Techniques and Discoveries in Protein Synthesis and Assembly Through Innovative Mitochondrial Research
09:53

Author Spotlight: Advancing Techniques and Discoveries in Protein Synthesis and Assembly Through Innovative Mitochondrial Research

Published on: June 7, 2024

1.0K

YB1 participated in regulating mitochondrial activity through RNA replacement.

Weipeng Gong1, Song Zhang2

  • 1Department of Gastrointestinal Surgery, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, Shandong, China.

Frontiers in Oncology
|April 10, 2023
PubMed
Summary

This study explores how a protein called YB1 interacts with mitochondrial RNA under stress conditions like starvation. Researchers found that when mitochondria release RNA into the cell, YB1 moves to the mitochondria and binds to this RNA. This binding causes a shift in the RNA that YB1 interacts with, replacing mRNAs for energy production and an oncogene. This change increases mitochondrial activity but reduces the stability of the oncogene’s mRNA. The result is increased cell death and reactive oxygen species in breast cancer cells. These findings suggest a new way to regulate cancer cell survival through RNA interactions.

Keywords:
HMGA1YB1apoptosisautophagymitochondriaYB1 and mitochondrial RNARNA replacement in cancerMitochondrial signaling pathwaysBreast cancer cell apoptosis

Frequently Asked Questions

More Related Videos

Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation
14:44

Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation

Published on: March 14, 2014

13.0K
Labelling and Visualization of Mitochondrial Genome Expression Products in Baker's Yeast Saccharomyces cerevisiae
08:33

Labelling and Visualization of Mitochondrial Genome Expression Products in Baker's Yeast Saccharomyces cerevisiae

Published on: April 11, 2021

4.5K

Related Experiment Videos

Last Updated: Aug 3, 2025

Author Spotlight: Advancing Techniques and Discoveries in Protein Synthesis and Assembly Through Innovative Mitochondrial Research
09:53

Author Spotlight: Advancing Techniques and Discoveries in Protein Synthesis and Assembly Through Innovative Mitochondrial Research

Published on: June 7, 2024

1.0K
Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation
14:44

Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation

Published on: March 14, 2014

13.0K
Labelling and Visualization of Mitochondrial Genome Expression Products in Baker's Yeast Saccharomyces cerevisiae
08:33

Labelling and Visualization of Mitochondrial Genome Expression Products in Baker's Yeast Saccharomyces cerevisiae

Published on: April 11, 2021

4.5K

Area of Science:

  • RNA biology in cancer metabolism
  • Mitochondrial signaling in breast cancer
  • Autophagy regulation through RNA interactions

Background:

Mitochondria are essential for energy production and cellular signaling. Their nucleic acids are involved in various processes, yet their role in signal transduction remains unclear. Autophagy and mitochondrial function are tightly linked, but the mechanisms are not fully understood. YB1 is known to regulate RNA, but its role in mitochondrial RNA dynamics is underexplored. Prior research has shown that YB1 influences gene expression and cancer progression. However, the connection between mitochondrial RNA leakage and YB1 activity has not been established. This gap motivated the investigation into how YB1 interacts with mitochondrial RNA under stress. The study aimed to uncover the signaling pathways affected by this interaction.

Purpose Of The Study:

The study aimed to explore how YB1 contributes to mitochondrial function and autophagy regulation. Researchers focused on the role of mitochondrial RNA in cellular signaling. They examined the effects of starvation on mitochondrial RNA leakage. The goal was to determine how YB1 binds and regulates different RNA species. The study also aimed to identify the consequences of RNA replacement on gene expression. Researchers wanted to understand the impact on breast cancer cell survival. They sought to clarify the relationship between YB1 and mitochondrial RNA dynamics. The findings could provide insights into new therapeutic strategies for cancer.

Main Methods:

The study used breast cancer cell models to simulate starvation conditions. Researchers measured mitochondrial RNA leakage into the cytosol. They tracked YB1's movement to the mitochondria under stress. RNA binding assays were performed to identify YB1's targets. The team analyzed the replacement of mRNAs by mitochondrial tRNAs. They quantified the levels of OXPHOS and HMGA1 mRNAs. The study also assessed the effects on mitochondrial activity and ROS production. Researchers used biochemical and imaging techniques to validate their findings.

Main Results:

Under starvation, mitochondrial RNA leaked into the cytosol. YB1 relocated to the mitochondria and bound to leaked RNA. Mitochondrial tRNAs replaced mRNAs for OXPHOS and HMGA1. Free OXPHOS mRNAs increased, enhancing mitochondrial activity. HMGA1 mRNA stability decreased without YB1 protection. This imbalance led to increased ROS and apoptosis in breast cancer cells. The findings suggest a novel regulatory mechanism involving YB1 and RNA. The study highlights the role of RNA replacement in cellular stress responses.

Conclusions:

The study suggests that YB1 regulates mitochondrial activity through RNA replacement. Mitochondrial RNA leakage under stress alters gene expression. The replacement of OXPHOS and HMGA1 mRNAs affects cancer cell survival. YB1's role in RNA binding is crucial for this process. The findings propose a new mechanism for autophagy and apoptosis regulation. This mechanism may influence breast cancer progression. The study highlights the importance of RNA interactions in cellular signaling. These results may inform future research on RNA-targeted therapies.

YB1 binds to mitochondrial RNA, replacing mRNAs for OXPHOS and HMGA1, altering gene expression and mitochondrial function.

Starvation conditions cause mitochondrial RNA to leak into the cytosol, prompting YB1 relocation and RNA replacement.

HMGA1 mRNA stability decreases without YB1 binding, leading to increased apoptosis and ROS production in cancer cells.

Free OXPHOS mRNAs released from the YB1 complex enhance mitochondrial activity through increased translation.

RNA replacement increases ROS and apoptosis, suggesting a potential role in cancer cell death mechanisms.

The study proposes YB1 as a potential therapeutic target for breast cancer through RNA regulation strategies.