Organizing Pneumonia with NGS False-Positive Imaging Resembling Tuberculosis: a Case Report
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Updated: Aug 2, 2025

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Published on: December 19, 2020
Background:
Organizing pneumonia (OP) is a pathologic concept characterized by the formation of granulation tissue from fibroblasts, myofibroblasts, collagen, and fibrotic exudate in the respiratory fine bronchi, alveolar ducts, and alveoli. The clinical imaging of mechanized pneumonia is variable, and histopathological examination is required to clarify the nature of the lesion when imaging is atypical. We report a case of OP with imaging resem-blance to pulmonary tuberculosis and false-positive next-generation sequencing (NGS), which was first misdiag-nosed as pulmonary tuberculosis.
Methods:
Appropriate laboratory tests, alveolar lavage fluid NGS, chest CT, bronchoscopy, percutaneous lung puncture, pathology.
Results:
Chest CT showed a nodular high-density shadow in the lower lobe of the right lung. According to the chest CT, bronchoalveolar lavage was performed in the dorsal segment of the right lower lobe of the lung. NGS of lavage fluid: the sequence number of Moraxella osseae was 1,423; the sequence number of Prevotella melanogaster was 1,129. Based on lung histopathology, fibrous emboli and necrotic material were seen in the alveolar lumen, and the final diagnosis of the OP was confirmed.
Conclusions:
It should be noted that physicians should not blindly believe the NGS result report. When the diagnosis is not clear and anti-infection treatment is ineffective, lung tissue should be obtained promptly for pathological examination to obtain pathological evidence to differentiate from misdiagnosed diseases.
Insights
This case highlights organizing pneumonia (OP) misdiagnosed as tuberculosis due to atypical imaging and false-positive next-generation sequencing (NGS). Prompt pathological examination is crucial for accurate diagnosis when clinical presentation is unclear.
Area of Science:
- Pulmonary pathology and diagnostics
- Infectious disease mimicry in the lung
Background:
- Organizing pneumonia (OP) is a pathological pattern characterized by granulation tissue in small airways and alveoli.
- OP imaging can be variable, often necessitating histopathology for definitive diagnosis, especially with atypical presentations.
- This case involved OP mimicking pulmonary tuberculosis with misleading next-generation sequencing (NGS) results.
Observation:
- Chest CT revealed a nodular high-density shadow in the right lower lung lobe.
- Bronchoalveolar lavage fluid underwent NGS, showing high sequence counts for Moraxella osseae and Prevotella melanogaster.
- Initial misdiagnosis was pulmonary tuberculosis based on imaging and NGS findings.
Findings:
- Lung histopathology confirmed organizing pneumonia, revealing fibrous emboli and necrotic material within the alveolar lumen.
- The NGS results for Moraxella osseae and Prevotella melanogaster were ultimately deemed non-diagnostic for active infection in this context.
- The patient's condition was clarified as organizing pneumonia, distinct from tuberculosis.
Implications:
- Physicians should exercise caution with NGS results, particularly when they conflict with clinical and imaging findings.
- In cases of diagnostic uncertainty or ineffective anti-infective treatment, prompt lung tissue biopsy for histopathological examination is vital.
- Accurate pathological diagnosis is essential to differentiate organizing pneumonia from other conditions like pulmonary tuberculosis and avoid inappropriate treatment.
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