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Reconstructing the pressure field around swimming fish using a physics-informed neural network.
Michael A Calicchia1, Rajat Mittal1, Jung-Hee Seo1
1The Department of Mechanical Engineering, The Johns Hopkins University, Baltimore, MD 21218, USA.
The Journal of Experimental Biology
|April 17, 2023
Summary
Researchers developed a new non-invasive method to reconstruct fish pressure sensing using particle image velocimetry (PIV) and physics-informed neural networks (PINN). This technique accurately maps pressure fields on fish, aiding studies on aquatic animal sensory systems.
Area of Science:
- Fluid Dynamics
- Biophysics
- Computational Biology
Background:
- Fish utilize pressure signals detected by their lateral line system for sensing predators, flow, and social interactions.
- Lateral line ablation is a common but invasive technique to study pressure sensing roles.
- A non-invasive method is needed to accurately measure pressure fields experienced by fish.
Purpose of the Study:
- To propose and validate a non-invasive method for reconstructing the instantaneous pressure field sensed by a fish's lateral line system.
- To utilize two-dimensional particle image velocimetry (PIV) and physics-informed neural networks (PINN) for pressure field reconstruction.
- To assess the method's accuracy and robustness using simulations and experimental data.
Main Methods:
- Developed a physics-informed neural network (PINN) model.
- Integrated PINN with two-dimensional particle image velocimetry (PIV) measurements.
- Satisfied Navier-Stokes equations and PIV data constraints for pressure field optimization.
- Validated the method with direct numerical simulation of a swimming mackerel (Scomber scombrus).
- Applied the method to experimental data of a turning zebrafish (Danio rerio).
Main Results:
- The proposed method accurately reconstructs the pressure field on the fish's body.
- The technique demonstrated robustness, being relatively insensitive to PIV measurement resolution.
- Successful validation was achieved through both numerical simulations and experimental data analysis.
- The method provides a detailed pressure map experienced by the fish.
Conclusions:
- A novel, non-invasive method using PINN and PIV can reconstruct fish pressure sensing fields.
- This approach offers a valuable tool for studying fish sensory biology without invasive procedures.
- The method's accuracy and insensitivity to PIV resolution enhance its applicability in aquatic biomechanics research.

