Synthesis, DNA binding and biological evaluation of benzimidazole Schiff base ligands and their metal(ii) complexes

Two novel benzimidazole ligands (E)-2-((4-(1H-benzo[d]imidazole-2-yl)phenylimino)methyl)-6-bromo-4-chlorophenol (L₁) and (E)-1-((4-(1H-benzo[d]imidazole-2-yl)phenylimino)methyl)naphthalene-2-ol (L₂) with their corresponding Cu(ii), Ni(ii), Pd(ii) and Zn(ii) complexes were designed and synthesized. The compounds were characterized by elemental, IR, and NMR (¹H & ¹³C) spectral analyses. Molecular masses were determined by ESI-mass spectrometry, and the structure of ligand L₁ was confirmed by single crystal X-ray diffraction analysis. Molecular docking was carried out for the theoretical investigation of DNA binding interactions. The results obtained were verified experimentally by UV/Visible absorption spectroscopy in conjunction with DNA thermal denaturation studies. It was observed that ligands (L₁ and L₂) and complexes (1-8) were moderate to strong DNA binders, as evident from the binding constants (K _b). The value was found to be highest for complex 2 (3.27 × 10⁵ M^-1) and lowest for 5 (6.40 × 10³ M^-1). A cell line study revealed that breast cancer cells were less viable to the synthesized compounds compared to that of standard drugs, cisplatin and doxorubicin, at the same concentration. The compounds were also screened for in vitro antibacterial activity for which complex 2 showed a promising broad-spectrum effect against all tested strains of bacteria, almost in the proximity of the reference drug kanamycin, while the rest of the compounds displayed activity against selected strains.