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Published on: October 11, 2018
Relationship between prediction accuracy and feature importance reliability: An empirical and theoretical study
Jianzhong Chen1, Leon Qi Rong Ooi2, Trevor Wei Kiat Tan2
1Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore.
Sufficient sample sizes improve neuroimaging feature importance reliability, enhancing prediction accuracy for cognitive, personality, and mental health measures. Haufe-transformed weights show superior reliability over other methods, suggesting a positive link between reliability and predictive performance.
Area of Science:
- Neuroimaging
- Computational Neuroscience
- Psychometrics
Background:
- Neuroimaging data is increasingly used to predict behavior.
- Feature importance quantifies predictive relevance but has shown low reliability.
- A potential trade-off exists between prediction accuracy and feature importance reliability.
Purpose of the Study:
- To investigate the universality of the trade-off between prediction accuracy and feature importance reliability.
- To determine if sufficient sample size can improve feature importance reliability.
- To compare the reliability of different feature importance methods.
Main Methods:
- Utilized a large sample size (2600 participants).
- Employed Haufe-transformed weights for feature importance estimation.
- Compared reliability with original regression weights and univariate FC-behavior correlations.
- Analyzed split-half reliability using intra-class correlation coefficients.
Main Results:
- Haufe-transformed weights achieved fair to excellent split-half reliability (ICC: 0.75 for cognitive, 0.57 for personality, 0.53 for mental health).
- Reliability was significantly higher than original regression weights and univariate correlations.
- Feature importance reliability positively correlated with prediction accuracy across phenotypes.
- Mathematical analysis showed reliability is necessary for low feature importance error.
Conclusions:
- Sufficient sample size enhances feature importance reliability in neuroimaging.
- Haufe-transformed weights offer a reliable method for interpreting predictive models.
- Improved feature importance reliability may lead to better prediction accuracy.
- Findings provide empirical and theoretical insights into neuroimaging-based behavioral prediction.
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