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Related Concept Videos

Peptide Identification Using Tandem Mass Spectrometry01:33

Peptide Identification Using Tandem Mass Spectrometry

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Tandem mass spectrometry, also known as MS/MS or MS2, is an analytical technique that employs two mass analyzers. Essentially it is a series of mass spectrometers that helps isolate a particular biomolecule and then helps study its chemical properties.
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
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Peptide Bonds02:43

Peptide Bonds

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A peptide bond covalently attaches amino acids through a dehydration reaction. One amino acid's carboxyl group and another amino acid's amino group combine, releasing a water molecule. The resulting bond is the peptide bond. The products that such linkages form are peptides. As more amino acids join this growing chain, the resulting chain is a polypeptide. Each polypeptide has a free amino group at one end. This end has the N-terminal, or the amino-terminal, and the other end has a free...
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Mitochondrial Precursor Proteins01:39

Mitochondrial Precursor Proteins

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Mitochondrial precursors are partially unfolded or loosely folded polypeptide chains. Newly synthesized precursors are inhibited from spontaneously folding into their native conformation by the cytosolic chaperones, heat shock proteins 70 (Hsp70), and mitochondrial import stimulation factors (MSFs). Precursors bound to MSFs are guided to the TOM70-TOM37 receptors, while precursors bound to Hsp70  chaperones are targetted to TOM20-TOM22 receptor complexes.
Most of the mitochondrial...
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Multi-Faceted Mass Spectrometric Investigation of Neuropeptides in Callinectes sapidus
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Deorphanizing Peptides Using Structure Prediction.

Felix Teufel1,2, Jan C Refsgaard1, Marina A Kasimova1

  • 1Digital Science & Innovation, Novo Nordisk A/S, Måløv 2760, Denmark.

Journal of Chemical Information and Modeling
|April 24, 2023
PubMed
Summary
This summary is machine-generated.

Identifying peptide receptors is difficult. This study uses AlphaFold-Multimer and transmembrane topology prediction to accurately identify peptide-receptor interactions, improving drug discovery for signaling pathways.

Area of Science:

  • Computational biology
  • Structural biology
  • Pharmacology

Background:

  • Endogenous peptides are crucial signaling molecules.

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  • Identifying their specific receptors (peptide deorphanization) is a major challenge in understanding cellular communication.
  • Current methods for receptor identification are often inefficient.