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Gaussian-Approximated Poisson Preconditioner for Iterative Diagonalization in Real-Space Density Functional Theory.

Jeheon Woo1, Seonghwan Kim1, Woo Youn Kim1

  • 1Department of Chemistry, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.

The Journal of Physical Chemistry. A
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This study introduces the Gaussian-approximated Poisson preconditioner (GAPP) to accelerate large-scale density functional theory (DFT) calculations. GAPP offers efficient convergence and low computational cost for real-space methods.

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Area of Science:

  • Computational Materials Science
  • Quantum Chemistry
  • Biophysics

Background:

  • Real-space methods are crucial for large-scale density functional theory (DFT) calculations of materials and biomolecules on parallel computers.
  • Iterative diagonalization of the Hamiltonian matrix presents a significant computational bottleneck in these real-space DFT calculations.
  • Existing iterative eigensolvers are limited by the lack of efficient real-space preconditioners, hindering overall computational efficiency.

Purpose of the Study:

  • To develop an efficient real-space preconditioner that accelerates convergence and minimizes computational cost for DFT calculations.
  • To introduce the Gaussian-approximated Poisson preconditioner (GAPP) as a solution to the bottleneck in iterative eigensolvers.

Main Methods:

  • Proposed a novel Gaussian-approximated Poisson preconditioner (GAPP).
  • Achieved low computational cost by approximating the Poisson Green's function with Gaussian functions.
  • Ensured fast convergence by optimizing Gaussian coefficients to accurately represent Coulomb energies.

Main Results:

  • The GAPP preconditioner satisfies the dual requirements of accelerated convergence and inexpensive computation.
  • Evaluated GAPP's performance on various molecular and extended systems.
  • GAPP demonstrated superior efficiency compared to existing preconditioners used in real-space DFT codes.

Conclusions:

  • The GAPP preconditioner is a highly efficient and suitable tool for real-space DFT calculations.
  • This method effectively addresses the computational bottleneck in large-scale electronic structure calculations.
  • GAPP significantly enhances the performance of real-space electronic structure codes.