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Related Concept Videos

Turnover Number and Catalytic Efficiency01:19

Turnover Number and Catalytic Efficiency

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The turnover number of an enzyme is the maximum number of substrate molecules it can transform per unit time. Turnover numbers for most enzymes range from 1 to 1000 molecules per second. Catalase has the known highest turnover number, capable of converting up to 2.8×106 molecules of hydrogen peroxide into water and oxygen per second. Lysozyme has the lowest known turnover number of half a molecule per second.
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Catalytically Perfect Enzymes01:07

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The theory of catalytically perfect enzymes was first proposed by W.J. Albery and J. R. Knowles in 1976. These enzymes catalyze biochemical reactions at high-speed. Their catalytic efficiency values range from 108-109 M-1s-1. These enzymes are also called 'diffusion-controlled' as the only rate-limiting step in the catalysis is that of the substrate diffusion into the active site. Examples include triose phosphate isomerase, fumarase, and superoxide dismutase.
 
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Related Experiment Video

Updated: Aug 1, 2025

Crystallization and Structural Determination of an Enzyme:Substrate Complex by Serial Crystallography in a Versatile Microfluidic Chip
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Crystallization and Structural Determination of an Enzyme:Substrate Complex by Serial Crystallography in a Versatile Microfluidic Chip

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Reconciling experimental catalytic data stemming from structure sensitivity.

Xue Zong1,2, Dionisios G Vlachos1,2

  • 1Department of Chemical and Biomolecular Engineering, University of Delaware 150 Academy St. Newark Delaware 19716 USA vlachos@udel.edu.

Chemical Science
|May 1, 2023
PubMed
Summary
This summary is machine-generated.

Catalyst structure sensitivity explains most variations in experimental reaction kinetics data. Smaller platinum nanoparticles show low reactivity due to carbon poisoning, with an optimal coordination number for maximum reaction rates.

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Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics
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Area of Science:

  • Chemical kinetics
  • Catalysis science
  • Nanoparticle characterization

Background:

  • Experimental kinetics data are crucial for model validation but show significant inter-laboratory variability.
  • The reasons for these discrepancies in literature data for the same catalyst and reaction remain unclear.
  • Understanding data variability is key to reliable catalyst development and kinetic modeling.

Purpose of the Study:

  • To rationalize the variability in literature kinetics data using catalyst structure sensitivity.
  • To develop a methodology for building structure-descriptor-based microkinetic models.
  • To investigate the relationship between nanoparticle structure and reaction kinetics for methane oxidation on platinum.

Main Methods:

  • Literature data mining of experimental kinetics for methane oxidation on platinum.
  • Development of a structure-descriptor-based microkinetic modeling approach.
  • Analysis of structure-reactivity relationships, focusing on nanoparticle size and coordination number.

Main Results:

  • A volcano-like trend in reaction rate was observed, correlating with an optimal coordination number.
  • Smaller platinum nanoparticles exhibited significantly reduced reactivity, attributed to carbon poisoning.
  • The majority of the observed data variation was successfully explained by catalyst structure sensitivity.

Conclusions:

  • Catalyst structure sensitivity is a primary driver of variability in experimental kinetics data.
  • The developed methodology enables prediction of kinetic performance and identification of optimal catalyst structures.
  • This approach serves as a valuable tool for assessing data quality and identifying experimental outliers.