Graph-based Fusion Modeling and Explanation forDisease Trajectory Prediction
Related Experiment Video
Updated: Jul 31, 2025

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
Published on: October 13, 2023
Amara Tariq1, Siyi Tang2, Hifza Sakhi3
1Department of Radiology, Mayo Clinic, AZ.
Abstract:
We propose a relational graph to incorporate clinical similarity between patients while building personalized clinical event predictors with a focus on hospitalized COVID-19 patients. Our graph formation process fuses heterogeneous data, i.e., chest X-rays as node features and non-imaging EHR for edge formation. While node represents a snap-shot in time for a single patient, weighted edge structure encodes complex clinical patterns among patients. While age and gender have been used in the past for patient graph formation, our method incorporates complex clinical history while avoiding manual feature selection. The model learns from the patient's own data as well as patterns among clinically-similar patients. Our visualization study investigates the effects of 'neighborhood' of a node on its predictiveness and showcases the model's tendency to focus on edge-connected patients with highly suggestive clinical features common with the node. The proposed model generalizes well by allowing edge formation process to adapt to an external cohort.
Related Concept Videos
End Point Prediction: Gran Plot
For potentiometric titration, the Gran plot is created by plotting...
Steps in Outbreak Investigation
Model Approaches for Pharmacokinetic Data: Distributed Parameter Models
The distributed parameter models are specifically designed to account for variations and differences in some drug classes. This model is particularly useful for assessing regional concentrations of anticancer or...
Time-Series Graph
Causality in Epidemiology
Mouse Models of Cancer Study
The development of transgenic, knockout, and knock-in mice has led to an exponential increase in their use as model organisms in research,...

