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Published on: April 19, 2013
Gene-based association study reveals a distinct female genetic signal in primary hypertension
Roei Zucker1, Michael Kovalerchik1, Michal Linial2
1The Rachel and Selim Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, 91904, Jerusalem, Israel.
Insights
This study used gene-based methods to identify hypertension genes, revealing sex-specific genetic effects and highlighting endothelial cell involvement. These findings improve understanding of hypertension
Area of Science:
- Genetics
- Cardiovascular Disease Research
- Genomic Epidemiology
Background:
- Hypertension is a complex polygenic disease affecting over 1.2 billion adults globally.
- It is a significant risk factor for severe renal, cerebrovascular, and cardiovascular diseases.
- Despite high heritability, the genetic mechanisms of hypertension are not fully understood.
Purpose of the Study:
- To investigate the genetic underpinnings of essential (primary) hypertension using advanced gene-based association methods.
- To compare findings from genome-wide association studies (GWAS) with proteome-wide association studies (PWAS).
- To identify novel hypertension-associated genes and explore sex-specific genetic influences.
Main Methods:
- Utilized UK-Biobank data from European ancestry, including 74,090 hypertension cases and 200,734 controls.
- Employed proteome-wide association studies (PWAS) and compared results with variant-based genome-wide association studies (GWAS).
- Validated identified genes in independent cohorts, including the Finnish Biobank, and analyzed sex-specific genetic effects.
Main Results:
- Identified 70 statistically significant genes associated with hypertension via PWAS, many not found in GWAS.
- Validated 30% of PWAS-associated genes in independent cohorts.
- Discovered significant sex-dependent genetic effects, with a stronger genetic component in females for both hypertension and blood pressure traits.
Conclusions:
- Gene-based association methods offer improved interpretability for hypertension genetics compared to traditional GWAS.
- Identified genes are enriched in endothelial cells across multiple organs, suggesting a role in vascular health.
- The study highlights the clinical utility of understanding sex-dependent genetic effects in hypertension management.
Abstract:
Hypertension is a polygenic disease that affects over 1.2 billion adults aged 30-79 worldwide. It is a major risk factor for renal, cerebrovascular, and cardiovascular diseases. The heritability of hypertension is estimated to be high; nevertheless, our understanding of its underlying mechanisms remains scarce and incomplete. This study covered the entries from European ancestry from the UK-Biobank (UKB), with 74,090 cases diagnosed with essential (primary) hypertension and 200,734 controls. We compared the findings from large-scale genome-wide association studies (GWAS) to the gene-based method of proteome-wide association studies (PWAS). We focused on 70 statistically significant associated genes, most of which failed to reach significance in variant-based GWAS. A total of 30% of the PWAS-associated genes were validated against independent cohorts, including the Finnish Biobank. Furthermore, gene-based analyses that were performed on both sexes revealed sex-dependent genetics with a stronger genetic component associated with females. Analysis of systolic and diastolic blood pressure measurements confirms a strong genetic effect associated with females. We demonstrated that gene-based approaches provide insight into the underlying biology of hypertension. Specifically, the expression profiles of the identified genes exposed the enrichment of endothelial cells from multiple organs. Furthermore, females' top-ranked significant genes are involved in cellular immunity. We conclude that studying hypertension and blood pressure via gene-based association methods improves interpretability and exposes sex-dependent genetic effects, which enhances clinical utility.
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