A CDK-Dependent Phosphorylation of a Novel Domain of Rif1 Regulates its Function during Telomere Damage and Other

Cameron M Robertson1, Yuan Xue1, Shobir Chowdhury1

  • 1Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK.

Insights

Rif1 phosphorylation at serines 57 and 110 inhibits its accumulation on damaged chromosomes, impacting cell proliferation during telomere damage. Checkpoint kinases and Cdk1 activity regulate this crucial DNA damage response.

Area of Science:

  • Cellular biology
  • Molecular genetics
  • DNA repair mechanisms

Background:

  • Rif1 protein is a key regulator of telomere length, DNA replication, and DNA damage responses in budding yeast.
  • Previous studies identified Rif1 posttranslational modifications, but their role in DNA damage response, particularly telomere damage, remained unclear.

Purpose of the Study:

  • To investigate posttranslational modifications of Rif1 during telomere damage.
  • To identify specific sites and regulatory mechanisms of Rif1 phosphorylation in response to DNA damage.

Main Methods:

  • Utilized immunoblotting techniques.
  • Employed budding yeast models: cdc13-1 mutant and tlc1Δ deletion strains to induce telomere damage.
  • Investigated the role of specific serine residues (S57, S110) and the phospho-gate domain (PGD) of Rif1.

Main Results:

  • Discovered that Rif1 is phosphorylated during telomere damage, with serines 57 and 110 in the novel PGD being critical.
  • Observed that Rif1 phosphorylation inhibits its accumulation on damaged chromosomes and impairs cell proliferation under telomere damage conditions.
  • Identified checkpoint kinases as upstream regulators and Cdk1 activity as essential for maintaining Rif1 phosphorylation.
  • Demonstrated that S57 and S110 phosphorylation is also essential during genotoxic stress and mitotic stress.

Conclusions:

  • Rif1 phosphorylation, particularly at S57 and S110 within the PGD, plays a significant role in cellular responses to telomere damage, genotoxic agents, and mitotic stress.
  • This phosphorylation event appears to act as an inhibitory mechanism, limiting Rif1's function on damaged DNA and affecting cell survival.
  • Proposed a novel "Pliers" model to elucidate the function of PGD phosphorylation in various DNA damage contexts.

Related Concept Videos

DNA Damage can Stall the Cell Cycle02:37

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
9.2K
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a...
3.7K
Inhibition of Cdk Activity02:34

Inhibition of Cdk Activity

The orderly progression of the cell cycle depends on the activation of Cdk protein by binding to its cyclin partner. However, the cell cycle must be restricted when undergoing abnormal changes. Most cancers correlate to the deregulated cell cycle, and since Cdks are a central component of the cell cycle, Cdk inhibitors are extensively studied to develop anticancer agents. For instance, cyclin D associates with several Cdks, such as Cdk 4/6, to form an active complex. The cyclin D-Cdk4/6 complex...
4.8K
Telomeres and Telomerase02:41

Telomeres and Telomerase

In eukaryotic DNA replication, a single-stranded DNA fragment remains at the end of a chromosome after the removal of the final primer. This section of DNA cannot be replicated in the same manner as the rest of the strand because there is no 3’ end to which the newly synthesized DNA can attach. This non-replicated fragment results in gradual loss of the chromosomal DNA during each cell duplication. Additionally, it can induce a DNA damage response by enzymes that recognize single-stranded...
23.6K
Regulation of the Unfolded Protein Response01:31

Regulation of the Unfolded Protein Response

Inositol-requiring kinase one or IRE1 is the most conserved eukaryotic unfolded protein response (UPR) receptor. It is a type I transmembrane protein kinase receptor with a distinctive site-specific RNase activity. As the binding mechanics of the misfolded proteins with the N-terminal domain of IRE-1 are unclear, three binding models — direct, indirect, and allosteric -- are proposed for receptor activation. Nevertheless, it is known that once a misfolded protein associates with IRE1, it...
2.5K
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...
3.8K