The ecological consequences and evolution of retron-mediated suicide as a way to protect Escherichia coli from being

Brandon A Berryhill1,2, Joshua A Manuel1, Rodrigo Garcia1

  • 1Department of Biology, Emory University, Atlanta, Georgia, United States of America.

Plos One
|May 5, 2023
PubMed

Insights

Retrons, DNA sequences with a reverse transcriptase, activate an abortive infection system to protect bacterial populations from bacteriophage (phage) predation. However, retron-bearing bacteria only offer a competitive advantage under specific conditions.

Area of Science:

  • Molecular Biology
  • Genetics
  • Evolutionary Biology

Background:

  • Retrons are DNA sequences encoding reverse transcriptase and multicopy single-stranded DNA (msDNA).
  • Recent research (2020) revealed retrons activate an abortive infection pathway against bacteriophage (phage) infection.

Purpose of the Study:

  • To explore conditions protecting bacterial populations from phage predation using retrons.
  • To investigate the evolution of retron-bearing bacteria in populations lacking this element.

Main Methods:

  • Mathematical modeling to analyze retron-mediated protection and evolution.
  • Experimental validation using isogenic Escherichia coli strains with and without the Ec48 retron and λVIR phage.

Main Results:

  • Retron-mediated abortive infection systems can protect bacterial populations from phage.
  • Retron-bearing bacteria exhibit a competitive advantage only under limited conditions.

Conclusions:

  • Retrons provide a defense mechanism against phage, but their ecological advantage is context-dependent.
  • Understanding retron function is crucial for microbial defense strategies.

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