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Targeting TAF1 with BAY-299 induces antitumor immunity in triple-negative breast cancer
Sheyu Zhang1, Xueying Liu2, Wenjun Chen2
1Tianjin University, School of Pharmaceutical Science and Technology, Tianjin, China.
Abstract:
Triple-negative breast cancer (TNBC) is a heterogeneous breast cancer subtype with poor prognoses and limited therapeutic options. The TATA-box binding protein associated factor 1 (TAF1) is an essential protein involved in the transcriptional regulation of cancer development and progress. However, the therapeutic potential and underlying mechanism of targeting TAF1 in TNBC remain unknown. Here, using chemical probe BAY-299, we identify that TAF1 inhibition leads to the induction of endogenous retrovirus (ERVs) expression and double-stranded RNA (dsRNA) formation, resulting in the activation of interferon responses and cell growth suppression in a subset of TNBC, resembling anti-viral mimicry effect. This correlation between TAF1 and interferon signature was validated in three independent breast cancer patient datasets. Furthermore, we observe heterogeneous responses to TAF1 inhibition across a set of TNBC cell lines. By integrating transcriptome and proteome data, we demonstrate that high levels of proliferating cell nuclear antigen (PCNA) protein serve as a predictive biomarker associated with suppressive tumor immune responses in various cancers, which may limit the efficiency of TAF1 inhibition.
Insights
Targeting TATA-box binding protein associated factor 1 (TAF1) in triple-negative breast cancer (TNBC) induces antiviral responses and suppresses growth. However, high proliferating cell nuclear antigen (PCNA) levels may limit treatment efficacy.
Area of Science:
- Oncology
- Molecular Biology
- Immunology
Background:
- Triple-negative breast cancer (TNBC) presents a significant clinical challenge due to its heterogeneity, poor prognosis, and limited therapeutic strategies.
- TATA-box binding protein associated factor 1 (TAF1) plays a crucial role in transcriptional regulation, implicating it in cancer progression, yet its therapeutic targeting in TNBC is unexplored.
Purpose of the Study:
- To investigate the therapeutic potential and underlying mechanisms of TAF1 inhibition in triple-negative breast cancer.
- To identify predictive biomarkers for TAF1 inhibition response in TNBC.
Main Methods:
- Utilized the chemical probe BAY-299 to inhibit TAF1 in TNBC models.
- Analyzed gene expression, endogenous retrovirus (ERV) induction, double-stranded RNA (dsRNA) formation, and interferon responses.
- Integrated transcriptome and proteome data from TNBC cell lines and patient datasets, including proliferating cell nuclear antigen (PCNA) analysis.
Main Results:
- TAF1 inhibition triggered endogenous retrovirus expression and double-stranded RNA accumulation, activating interferon responses and suppressing cell growth in a subset of TNBC.
- This TAF1-interferon axis correlation was confirmed across independent patient cohorts.
- Heterogeneous responses to TAF1 inhibition were observed, with high proliferating cell nuclear antigen (PCNA) protein levels identified as a potential biomarker for suppressed anti-tumor immunity and limited treatment efficacy.
Conclusions:
- TAF1 inhibition can induce an anti-viral mimicry response, leading to growth suppression in specific TNBC subtypes.
- The study validates the link between TAF1 and interferon signaling in breast cancer.
- Proliferating cell nuclear antigen (PCNA) serves as a predictive biomarker, highlighting potential limitations of TAF1 inhibition in tumors with suppressed immune microenvironments.
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