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Published on: May 9, 2020
HKDC1 Silencing Inhibits Proliferation and Glycolysis of Gastric Cancer Cells
Chen Yu1, Ting-Ting Bao1, Li Jin2,3
1Department of Integrated TCM & Western Medicine, Jiangsu Cancer Hospital & Jiangsu Institute of Cancer Research & the Affiliated Cancer Hospital of Nanjing Medical University, 42 Baiziting Road, Nanjing 210009, China.
Abstract:
Gastric cancer (GC) is the third most lethal and fifth most common cancer in the world. In a variety of cancers, the hexokinase domain component 1 (HKDC1) is carcinogenic. This study was to investigate into how HKDC1 contributes to the development and progression of GC. Three different datasets (GSE103236, GSE13861, and GSE55696) were extracted from the Gene Expression Omnibus (GEO) database and then analyzed using the sva package. The R software was used to identify 411 differentially expressed genes (DEGs) in the pooled dataset. We discovered 326 glycolysis-related genes (glyGenes) in the cancer genome atlas-stomach adenocarcinoma (TCGA-STAD) cohort using gene set enrichment analysis set (GSEA). HKDC1 is one of the most prevalent glyGenes in GC tumor tissues and cells, as seen in the Venn diagram. According to the results of the Cell Count Kit-8 assay, the proliferation of AGS and MKN-45 cells decreased when HKDC1 was knocked down. Lack of HKDC1 in cells enhanced oxygen consumption and decreased glycolytic protein expression while suppressing glucose absorption, lactate production, ATP level, and extracellular acidification ratio. As an oncogene in gastric cancer development, HKDC1 influences cell proliferation and glycolysis.
Insights
Hexokinase domain component 1 (HKDC1) drives gastric cancer (GC) progression by promoting cell proliferation and glycolysis. Knocking down HKDC1 inhibits GC cell growth and alters metabolic pathways, highlighting its oncogenic role.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Gastric cancer (GC) is a significant global health challenge, ranking as the third most lethal and fifth most common cancer.
- The hexokinase domain component 1 (HKDC1) has been identified as a potential oncogene implicated in various cancer types.
Purpose of the Study:
- To investigate the specific role of HKDC1 in the development and progression of gastric cancer.
- To elucidate the molecular mechanisms by which HKDC1 influences GC cell behavior and metabolism.
Main Methods:
- Analysis of three Gene Expression Omnibus (GEO) datasets (GSE103236, GSE13861, GSE55696) using sva package and R software.
- Identification of differentially expressed genes (DEGs) and glycolysis-related genes (glyGenes) in the TCGA-STAD cohort via gene set enrichment analysis (GSEA).
- Functional assays including Cell Count Kit-8, oxygen consumption, glucose uptake, lactate production, and ATP level measurements following HKDC1 knockdown in GC cell lines (AGS and MKN-45).
Main Results:
- A total of 411 DEGs were identified in the pooled GC dataset.
- HKDC1 was identified as a prevalent glyGene in GC tumor tissues and cells.
- HKDC1 knockdown significantly reduced GC cell proliferation, suppressed glucose absorption and lactate production, decreased ATP levels, and lowered the extracellular acidification rate, while increasing oxygen consumption.
Conclusions:
- HKDC1 acts as an oncogene in gastric cancer development.
- HKDC1 significantly influences GC cell proliferation and glycolysis.
- Targeting HKDC1 may represent a potential therapeutic strategy for gastric cancer.
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