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JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics
Published on: October 19, 2021
Multi-omics data integration reveals the molecular network of dysregulation IQGAP2-mTOR promotes cell proliferation
Tao Chen1,2,3, Xijie Fan1,2, Guibin Li1,2
1Guangzhou KingMed Transformative Medicine Institute Co. Ltd., No. 10 Luoxuan 3Rd Road, Guangzhou International Biotech Island, Guangzhou, China.
Abstract:
IQGAP2 as a tumor suppressor gene can influence cell proliferation in multiple tumor cell lines. However, the regulation network of cell proliferation resulting solely from the deficiency of IQGAP2 in cells was still unclear. Here, we integrated transcriptome, proteome, and phosphoproteome analyses to investigate the regulatory network of cell proliferation in IQGAP2 knockdown HaCaT and HEK293 cells. Our findings revealed that the dysregulation of the IQGAP2-mTOR molecular network led to increased cell proliferation. We demonstrated that IQGAP2 knockdown enhanced the phosphorylation levels of AKT and S6K, leading to increased cell proliferation. Additionally, we found that AKT and mTOR inhibitors partially rescued abnormal cell proliferation by reducing hyperphosphorylation. Our data suggest a potential connection between the mTOR signaling pathway and aberrant cell proliferation in IQGAP2 knockdown cells. These findings offer a new therapeutic strategy for patients with IQGAP2 deficiency.
Insights
Deficiency in the IQGAP2 tumor suppressor gene disrupts the IQGAP2-mTOR network, increasing cell proliferation. Inhibiting AKT and mTOR partially reverses this abnormal cell growth, suggesting a therapeutic strategy for IQGAP2-deficient conditions.
Area of Science:
- Molecular Biology
- Cell Biology
- Oncology
Background:
- IQGAP2 functions as a tumor suppressor gene, impacting cell proliferation across various cancer cell lines.
- The precise regulatory network governing cell proliferation due to IQGAP2 deficiency remains incompletely understood.
Purpose of the Study:
- To elucidate the regulatory network of cell proliferation in response to IQGAP2 deficiency.
- To investigate the molecular mechanisms underlying increased cell proliferation in IQGAP2-deficient cells.
Main Methods:
- Integrated analysis of transcriptome, proteome, and phosphoproteome data.
- Utilized IQGAP2 knockdown models in HaCaT and HEK293 cell lines.
- Employed AKT and mTOR inhibitors to assess rescue effects on cell proliferation.
Main Results:
- IQGAP2 knockdown led to the dysregulation of the IQGAP2-mTOR molecular network, resulting in elevated cell proliferation.
- Knockdown of IQGAP2 enhanced the phosphorylation of AKT and S6K, contributing to increased cell proliferation.
- AKT and mTOR inhibitors partially restored normal cell proliferation by mitigating hyperphosphorylation.
Conclusions:
- IQGAP2 deficiency dysregulates the IQGAP2-mTOR pathway, promoting aberrant cell proliferation.
- The mTOR signaling pathway is implicated in the uncontrolled cell proliferation observed in IQGAP2 knockdown cells.
- These findings present a potential therapeutic avenue for managing conditions associated with IQGAP2 deficiency.
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