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Polymerase chain reaction-based methods for the detection of heat-resistant ascomycetous fungi
1a Medical Mycology Research Center, Chiba University.
Abstract:
There is increasing incidence of food spoilage and health hazards caused by heat-resistant fungi belonging to the genera Byssochlamys, Thermoascus, and Neosartorya, among others. Their ascospores cannot be sterilized by heating the food. The microbiological risk assessment studies of these fungi during the production of food and beverages indicated that these fungal species or genera in food are associated with different health risks. Therefore, it is necessary to distinguish Byssochlamys, Thermoascus, and Neosartorya from other fungi in the food industry. These genera can be identified by sequence analysis of housekeeping genes such as β-tubulin, but the process is costly and time-consuming. Therefore, rapid and simple PCR-based methods have been developed using specific primer sets for genus- or species-level identification. PCR amplification products are observed to be specific for each of these genera or species and do not cross-react with other fungi associated with food spoilage and environmental contamination. These identification methods are simple, rapid, and highly specific, making them feasible for use in the quality management of food production plants.
Insights
Heat-resistant fungi like Byssochlamys, Thermoascus, and Neosartorya pose food spoilage and health risks. Rapid PCR methods offer a simple, specific way to identify these fungi in food production.
Area of Science:
- Food microbiology
- Mycology
- Molecular biology
Background:
- Heat-resistant fungi (Byssochlamys, Thermoascus, Neosartorya) are increasingly linked to food spoilage and health hazards.
- Their ascospores resist standard sterilization, posing a significant microbiological risk in food and beverages.
- Accurate identification of these genera is crucial for food safety and quality management.
Purpose of the Study:
- To develop and validate rapid, specific methods for identifying foodborne heat-resistant fungi.
- To differentiate between Byssochlamys, Thermoascus, Neosartorya, and other common food spoilage fungi.
- To provide a feasible tool for quality control in food production.
Main Methods:
- Utilized Polymerase Chain Reaction (PCR) with genus- and species-specific primer sets.
- Analyzed housekeeping genes (e.g., β-tubulin) for fungal identification.
- Tested primer specificity against target genera and other common food contaminants.
Main Results:
- Developed PCR-based assays that accurately identify Byssochlamys, Thermoascus, and Neosartorya.
- Observed high specificity of PCR amplification products, with no cross-reactivity to other fungal species.
- Demonstrated the speed and simplicity of PCR compared to traditional sequencing methods.
Conclusions:
- PCR methods provide a rapid, simple, and highly specific means for identifying critical heat-resistant fungi.
- These methods are suitable for routine quality management in food production facilities.
- Effective identification aids in mitigating food spoilage and associated health risks.
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