Related Experiment Video
Updated: Jul 30, 2025

Novel Sequence Discovery by Subtractive Genomics
Published on: January 25, 2019
TRviz: a Python library for decomposing and visualizing tandem repeat sequences
Jonghun Park1, Eli Kaufman2, Paul N Valdmanis2
1Department of Computer Science & Engineering, University of California, San Diego, La Jolla, CA 92093, USA.
Summary:
TRviz is an open-source Python library for decomposing, encoding, aligning and visualizing tandem repeat (TR) sequences. TRviz takes a collection of alleles (TR containing sequences) and one or more motifs as input and generates a plot showing the motif composition of the TR sequences.
Availability And Implementation:
TRviz is an open-source Python library and freely available at https://github.com/Jong-hun-Park/trviz. Detailed documentation is available at https://trviz.readthedocs.io.
Supplementary Information:
Supplementary data are available at Bioinformatics Advances online.
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