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Genomic Profiling of Radiation-Induced Sarcomas Reveals the Immunologic Characteristics and Its Response to Immune
Dong-Chun Hong1, Jing Yang1, Cong Sun2
1Melanoma and Sarcoma Medical Oncology Unit, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, China.
Purpose:
Radiation-induced sarcomas (RIS) have a poor prognosis and lack effective treatments. Its genome and tumor microenvironment are not well characterized and need further exploration.
Experimental Design:
Here, we performed whole-exome sequencing (WES) and mRNA sequencing (mRNA-seq) on patients with RIS and primary sarcomas (WES samples 46 vs. 48, mRNA-seq samples 16 vs. 8, mainly in head and neck), investigated the antitumor effect of programmed cell death protein 1 (PD-1) blockade in RIS patient-derived xenograft models, and analyzed clinical data of patients with RIS treated with chemotherapy alone or combined with an anti-PD-1 antibody.
Results:
Compared with primary sarcomas, RIS manifested different patterns of copy-number variations, a significantly higher number of predicted strong MHC-binding neoantigens, and significantly increased immune cell infiltration. Clinical data showed that the combinatorial use of chemotherapy and PD-1 blockade achieved a higher objective response rate (36.67% vs. 8.00%; P = 0.003), longer overall survival (31.9 months vs. 14.8 months; P = 0.014), and longer progression-free survival (4.7 months vs. 9.5 months; P = 0.032) in patients with RIS compared with single chemotherapy.
Conclusions:
Elevated genomic instability and higher immune cell infiltrations were found in RIS than in primary sarcomas. Moreover, higher efficacy of chemotherapy plus PD-1 blockade was observed in animal experiments and clinical practice. This evidence indicated the promising application of immune checkpoint inhibitors in the treatment of RIS.
Insights
Radiation-induced sarcomas (RIS) show increased genomic instability and immune cell infiltration compared to primary sarcomas. Combining chemotherapy with PD-1 blockade significantly improves treatment outcomes for RIS patients.
Area of Science:
- Oncology
- Genomics
- Immunotherapy
Background:
- Radiation-induced sarcomas (RIS) present a significant clinical challenge with limited effective treatment options.
- The genomic landscape and tumor microenvironment of RIS remain underexplored, hindering therapeutic development.
Purpose of the Study:
- To characterize the genomic and immune profiles of RIS.
- To evaluate the efficacy of programmed cell death protein 1 (PD-1) blockade in treating RIS.
Main Methods:
- Whole-exome sequencing (WES) and mRNA sequencing (mRNA-seq) were performed on RIS and primary sarcoma samples.
- Patient-derived xenograft models were used to assess the antitumor effects of PD-1 blockade.
- Clinical data from RIS patients treated with chemotherapy alone or in combination with anti-PD-1 therapy were analyzed.
Main Results:
- RIS exhibited distinct copy-number variation patterns, a higher number of predicted neoantigens, and increased immune cell infiltration compared to primary sarcomas.
- Combination therapy (chemotherapy + PD-1 blockade) resulted in a higher objective response rate (36.67% vs. 8.00%), longer overall survival (31.9 vs. 14.8 months), and longer progression-free survival (9.5 vs. 4.7 months) compared to chemotherapy alone.
- P-values: P = 0.003 for ORR, P = 0.014 for OS, P = 0.032 for PFS.
Conclusions:
- RIS is characterized by elevated genomic instability and heightened immune cell infiltration.
- Chemotherapy combined with PD-1 blockade demonstrates superior efficacy in both preclinical models and clinical practice for RIS treatment.
- Immune checkpoint inhibitors show promising therapeutic potential for radiation-induced sarcomas.
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