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Published on: July 25, 2019
Illuminating DEPDC1B in Multi-pronged Regulation of Tumor Progression
Howard E Boudreau1, Jennifer Robinson1, Usha N Kasid2
1Georgetown Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, USA, D.C.
Abstract:
DEPDC1B (aliases BRCC3, XTP8, XTP1) is a DEP (Dishevelled, Egl-1, Pleckstrin) and Rho-GAP-like domains containing predominately membrane-associated protein. Earlier, we and others have reported that DEPDC1B is a downstream effector of Raf-1 and long noncoding RNA lncNB1, and an upstream positive effector of pERK. Consistently, DEPDC1B knockdown is associated with downregulation of ligand-stimulated pERK expression. We demonstrate here that DEPDC1B N-terminus binds to the p85 subunit of PI3K, and DEPDC1B overexpression results in decreased ligand-stimulated tyrosine phosphorylation of p85 and downregulation of pAKT1. Collectively, we propose that DEPDC1B is a novel cross-regulator of AKT1 and ERK, two of the prominent pathways of tumor progression. Our data showing high levels of DEPDC1B mRNA and protein during the G2/M phase have significant implications in cell entry into mitosis. Indeed, DEPDC1B accumulation during the G2/M phase has been associated with disassembly of focal adhesions and cell de-adhesion, referred to as a DEPDC1B-mediated de-adhesion mitotic checkpoint. DEPDC1B is a direct target of transcription factor SOX10, and SOX10-DEPDC1B-SCUBE3 axis has been associated with angiogenesis and metastasis. The Scansite analysis of the DEPDC1B amino acid sequence shows binding motifs for three well-established cancer therapeutic targets CDK1, DNA-PK, and aurora kinase A/B. These interactions and functionalities, if validated, may further implicate DEPDC1B in regulation of DNA damage-repair and cell cycle progression processes. Finally, a survey of the publicly available datasets indicates that high DEPDC1B expression is a viable biomarker in breast, lung, pancreatic and renal cell carcinomas, and melanoma. Currently, the systems and integrative biology of DEPDC1B is far from comprehensive. Future investigations are necessary in order to understand how DEPDC1B might impact AKT, ERK, and other networks, albeit in a context-dependent manner, and influence the actionable molecular, spatial, and temporal vulnerabilities within these networks in cancer cells.
Insights
DEPDC1B protein regulates key cancer pathways AKT and ERK. High DEPDC1B expression may serve as a biomarker for multiple cancers, including breast and lung carcinoma.
Area of Science:
- Molecular Biology
- Cancer Biology
- Cell Signaling
Background:
- DEPDC1B is a membrane-associated protein with known roles in regulating ERK signaling.
- Previous studies identified DEPDC1B as a downstream effector of Raf-1 and lncNB1.
Purpose of the Study:
- To elucidate the role of DEPDC1B in regulating PI3K/AKT and ERK signaling pathways.
- To investigate DEPDC1B's function in cell cycle progression and its potential as a cancer biomarker.
Main Methods:
- Investigated DEPDC1B interactions with PI3K/AKT pathway components using biochemical assays.
- Analyzed DEPDC1B expression patterns during the cell cycle.
- Performed bioinformatic analysis of DEPDC1B sequence for potential therapeutic target binding sites.
- Surveyed public datasets for DEPDC1B expression in various cancer types.
Main Results:
- DEPDC1B directly binds to the p85 subunit of PI3K, inhibiting AKT activation.
- DEPDC1B levels peak during G2/M phase, correlating with focal adhesion disassembly and mitotic entry.
- DEPDC1B is a direct target of SOX10, and the SOX10-DEPDC1B-SCUBE3 axis is linked to angiogenesis and metastasis.
- DEPDC1B sequence contains motifs for binding cancer therapeutic targets like CDK1 and aurora kinases.
- High DEPDC1B expression is identified as a potential biomarker in breast, lung, pancreatic, renal, and melanoma cancers.
Conclusions:
- DEPDC1B acts as a novel cross-regulator of AKT and ERK pathways, crucial in tumor progression.
- DEPDC1B plays a role in cell cycle regulation, specifically during mitosis via a de-adhesion checkpoint.
- DEPDC1B's interactions suggest potential roles in DNA repair and cell cycle control.
- DEPDC1B is a promising pan-cancer biomarker, warranting further investigation into its therapeutic potential.
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