Related Experiment Video
Updated: Jul 30, 2025

Correlating Gene-specific DNA Methylation Changes with Expression and Transcriptional Activity of Astrocytic KCNJ10 Kir4.1
Published on: September 26, 2015
DNA Methylation-Mediated Mfn2 Gene Regulation in the Brain: A Role in Brain Trauma-Induced Mitochondrial Dysfunction
Prakash G Kulkarni1, Nagalakshmi Balasubramanian1, Ritika Manjrekar1
1Department of Biotechnology, Savitribai Phule Pune University, Pune, 411 007, India.
Abstract:
Repeated mild traumatic brain injuries (rMTBI) affect mitochondrial homeostasis in the brain. However, mechanisms of long-lasting neurobehavioral effects of rMTBI are largely unknown. Mitofusin 2 (Mfn2) is a critical component of tethering complexes in mitochondria-associated membranes (MAMs) and thereby plays a pivotal role in mitochondrial functions. Herein, we investigated the implications of DNA methylation in the Mfn2 gene regulation, and its consequences on mitochondrial dysfunction in the hippocampus after rMTBI. rMTBI dramatically reduced the mitochondrial mass, which was concomitant with decrease in Mfn2 mRNA and protein levels. DNA hypermethylation at the Mfn2 gene promoter was observed post 30 days of rMTBI. The treatment of 5-Azacytidine, a pan DNA methyltransferase inhibitor, normalized DNA methylation levels at Mfn2 promoter, which further resulted into restoration of Mfn2 function. The normalization of Mfn2 function was well correlated with recovery in memory deficits in rMTBI-exposed rats. Since, glutamate excitotoxicity serves as a primary insult after TBI, we employed in vitro model of glutamate excitotoxicity in human neuronal cell line SH-SY5Y to investigate the causal epigenetic mechanisms of Mfn2 gene regulation. The glutamate excitotoxicity reduced Mfn2 levels via DNA hypermethylation at Mfn2 promoter. Loss of Mfn2 caused significant surge in cellular and mitochondrial ROS levels with lowered mitochondrial membrane potential in cultured SH-SY5Y cells. Like rMTBI, these consequences of glutamate excitotoxicity were also prevented by 5-AzaC pre-treatment. Therefore, DNA methylation serves as a vital epigenetic mechanism involved in Mfn2 expression in the brain; and this Mfn2 gene regulation may play a pivotal role in rMTBI-induced persistent cognitive deficits. Closed head weight drop injury method was employed to induce repeated mild traumatic brain (rMTBI) in jury in adult, male Wistar rats. rMTBI causes hyper DNA methylation at the Mfn2 promoter and lowers the Mfn2 expression triggering mitochondrial dysfunction. However, the treatment of 5-azacytidine normalizes DNA methylation at the Mfn2 promoter and restores mitochondrial function.
Insights
Repeated mild traumatic brain injuries (rMTBI) cause DNA hypermethylation of the Mfn2 gene, leading to mitochondrial dysfunction and memory deficits. Treatment with 5-Azacytidine reversed these effects, restoring Mfn2 function and cognitive recovery.
Area of Science:
- Neuroscience
- Epigenetics
- Mitochondrial Biology
Background:
- Repeated mild traumatic brain injuries (rMTBI) are linked to long-lasting neurobehavioral deficits, but the underlying mechanisms remain unclear.
- Mitofusin 2 (Mfn2) is crucial for mitochondrial function and tethering within mitochondria-associated membranes (MAMs).
Purpose of the Study:
- To investigate the role of DNA methylation in regulating Mfn2 gene expression following rMTBI.
- To explore the consequences of Mfn2 dysregulation on mitochondrial function and cognitive deficits in an rMTBI model.
- To examine the therapeutic potential of epigenetic modulation in mitigating rMTBI-induced brain injury.
Main Methods:
- Induction of rMTBI in adult male Wistar rats using a closed head weight drop injury model.
- Analysis of Mfn2 mRNA and protein levels, mitochondrial mass, and DNA methylation status at the Mfn2 promoter post-rMTBI.
- In vitro studies using SH-SY5Y human neuronal cells exposed to glutamate excitotoxicity to model TBI-related insults.
- Treatment with 5-Azacytidine (5-AzaC), a DNA methyltransferase inhibitor, to assess its effects on Mfn2 expression and mitochondrial function.
Main Results:
- rMTBI significantly reduced Mfn2 expression and mitochondrial mass, accompanied by DNA hypermethylation at the Mfn2 promoter.
- 5-Azacytidine treatment normalized Mfn2 promoter methylation, restored Mfn2 levels and function, and ameliorated memory deficits in rMTBI rats.
- In vitro, glutamate excitotoxicity induced Mfn2 downregulation via DNA hypermethylation, leading to increased ROS and decreased mitochondrial membrane potential, effects prevented by 5-AzaC.
- Loss of Mfn2 function correlated with elevated cellular and mitochondrial ROS and reduced mitochondrial membrane potential.
Conclusions:
- DNA methylation is a critical epigenetic mechanism regulating Mfn2 expression in the brain.
- Mfn2 gene regulation plays a pivotal role in persistent cognitive deficits following rMTBI.
- Epigenetic targeting of Mfn2 with agents like 5-Azacytidine offers a potential therapeutic strategy for rMTBI-induced neuroinflammation and cognitive impairment.
Related Concept Videos
Epigenetic Regulation
X-chromosome...
Phase II Reactions: Methylation Reactions
The mechanism of methylation unfolds in two stages. The first stage sees a methyltransferase enzyme facilitating the transfer of a methyl group from S-adenosylmethionine (SAM) to the substrate, forming S-adenosylhomocysteine (SAH). The second stage involves further metabolism of SAH into homocysteine, which can be recycled...
Role of Neurotransmitters in Memory
Glutamate and Synaptic Plasticity
Glutamate, the brain's main excitatory neurotransmitter, is...
Animal Mitochondrial Genetics

