Cumulative effects of weakly repressive regulatory regions in the 3' UTR maintain PD-1 expression homeostasis in

Xiaoqian Lai1, Rong Li1, Panpan Wang1

  • 1Molecular Cancer Research Center, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, 518107, China.

Insights

The PD-1 3' untranslated region (UTR) maintains immune homeostasis by repressing gene expression through mRNA decay. This regulation involves multiple RNA-binding proteins and conserved regulatory elements, offering insights into gene expression control.

Area of Science:

  • Immunology
  • Molecular Biology
  • Cancer Research

Background:

  • Programmed cell death protein 1 (PD-1) is a key target in cancer immunotherapy.
  • The precise molecular mechanisms governing PD-1 expression homeostasis are not fully understood.

Purpose of the Study:

  • To elucidate the role of the PD-1 3' untranslated region (UTR) in regulating PD-1 expression.
  • To identify factors that contribute to PD-1 expression homeostasis.

Main Methods:

  • Analysis of PD-1 3' UTR function in gene expression.
  • Identification of RNA-binding proteins (RBPs) interacting with the PD-1 3' UTR.
  • Investigation of T cell activity and T-ALL cell proliferation upon PD-1 3' UTR deletion.

Main Results:

  • The PD-1 3' UTR significantly represses gene expression by promoting mRNA decay.
  • Deletion of the PD-1 3' UTR impairs T cell activity and enhances T-ALL cell proliferation.
  • Cumulative effects of numerous weak regulatory regions within the 3' UTR maintain PD-1 homeostasis.
  • Specific RBPs (IGF2BP2, RBM38, SRSF7, SRSF4) were identified as modulators of PD-1 expression via the 3' UTR.
  • PD-1 3' UTRs exhibit functional conservation and common RBP binding sites despite evolutionary divergence.

Conclusions:

  • The PD-1 3' UTR plays a critical, previously unrecognized role in maintaining PD-1 expression homeostasis.
  • A model is proposed where cumulative small regulatory effects orchestrate gene expression and biological outcomes.
  • Findings offer potential therapeutic targets for modulating PD-1 expression in cancer.

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