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Characterizing Exon Skipping Efficiency in DMD Patient Samples in Clinical Trials of Antisense Oligonucleotides
Published on: May 7, 2020
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Elevated nuclear TDP-43 induces constitutive exon skipping
Rogger P Carmen-Orozco1,2, William Tsao1,2, Yingzhi Ye3
1Department of Pathology Johns Hopkins School of Medicine, Baltimore, MD 21205.
Biorxiv : the Preprint Server for Biology
|May 22, 2023
Summary
Excessive nuclear TDP-43 protein causes species-specific exon skipping, not directly linked to neurodegenerative disease progression. This highlights caution needed when using TDP-43 overexpression models for disease research.
Area of Science:
- Molecular Biology
- Neuroscience
- Genetics
Background:
- TDP-43 proteinopathies are linked to cytoplasmic inclusions and nuclear loss of TDP-43.
- Gain- and loss-of-function mechanisms are implicated in neurodegenerative diseases involving TDP-43.
Approach:
- Investigated TDP-43 gain-of-function using overexpression models.
- Analyzed species-specific effects of excessive nuclear TDP-43 on RNA splicing.
- Examined correlation between aberrant exon skipping and human neurodegenerative disease.
Key Points:
- TDP-43 overexpression induces constitutive exon skipping, with significant species-specific differences.
- Aberrant exon skipping in human brains was not correlated with disease state.
- Loss of TDP-43, not overexpression, correlated with cryptic exon incorporation.
Conclusions:
- Caution is required when interpreting TDP-43 overexpression data in disease models.
- Controlling for TDP-43-induced exon skipping is crucial for accurate modeling of TDP-43 proteinopathies.
- Understanding TDP-43's subcellular toxicity is key for developing neurodegenerative disease therapies.
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