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Updated: Jul 29, 2025

Using the E1A Minigene Tool to Study mRNA Splicing Changes
Published on: April 22, 2021
Differential functions of the KRAS splice variants
Juan Kochen Rossi1, Cristina Nuevo-Tapioles1, Mark R Philips1
1Laura and Isaac Perlmutter Cancer Center, NYU Grossman School of Medicine, New York, NY, U.S.A.
Abstract:
RAS proteins are small GTPases that transduce signals from membrane receptors to signaling pathways that regulate growth and differentiation. Four RAS proteins are encoded by three genes - HRAS, KRAS, NRAS. Among them, KRAS is mutated in human cancer more frequently than any other oncogene. The KRAS pre-mRNA is alternatively spliced to generate two transcripts, KRAS4A and KRAS4B, that encode distinct proto-oncoproteins that differ almost exclusively in their C-terminal hypervariable regions (HVRs) that controls subcellular trafficking and membrane association. The KRAS4A isoform arose 475 million years ago in jawed vertebrates and has persisted in all vertebrates ever since, strongly suggesting non-overlapping functions of the splice variants. Because KRAS4B is expressed at higher levels in most tissues, it has been considered the principal KRAS isoform. However, emerging evidence for KRAS4A expression in tumors and splice variant-specific interactions and functions have sparked interest in this gene product. Among these findings, the KRAS4A-specific regulation of hexokinase I is a stark example. The aim of this mini-review is to provide an overview of the origin and differential functions of the two splice variants of KRAS.
Insights
KRAS proteins are key in cell signaling and cancer. This review explores the distinct roles of KRAS4A and KRAS4B splice variants, highlighting KRAS4A
Area of Science:
- Molecular Biology
- Cellular Signaling
- Cancer Genetics
Background:
- RAS proteins are crucial GTPases regulating cell growth and differentiation.
- KRAS is frequently mutated in human cancers, making it a significant oncogene.
- Alternative splicing of KRAS pre-mRNA yields KRAS4A and KRAS4B isoforms with distinct C-terminal hypervariable regions.
Approach:
- This mini-review synthesizes current research on KRAS splice variants.
- It examines the evolutionary origin and differential functions of KRAS4A and KRAS4B.
- The review highlights splice variant-specific interactions and cellular roles, such as KRAS4A's regulation of hexokinase I.
Key Points:
- KRAS4A and KRAS4B isoforms differ in their C-terminal hypervariable regions, affecting subcellular localization and membrane association.
- KRAS4A, though less abundant, exhibits unique functions and expression in tumors.
- Emerging evidence suggests non-overlapping roles for these splice variants, challenging the notion of KRAS4B as the sole principal isoform.
Conclusions:
- Understanding the differential functions of KRAS4A and KRAS4B is critical for cancer research.
- KRAS4A's specific roles, including its regulation of hexokinase I, warrant further investigation.
- This review provides an overview of the evolutionary and functional divergence of KRAS splice variants.
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