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Epistasis and evolution: recent advances and an outlook for prediction
Milo S Johnson1,2, Gautam Reddy3,4, Michael M Desai5
1Department of Integrative Biology, University of California, Berkeley, CA, USA.
BMC Biology
|May 24, 2023
Summary
Evolutionary changes in mutation effects due to epistasis can alter adaptability. Recent advances in modeling and predicting epistasis in microbial cells and proteins show simple global patterns that promise to forecast evolutionary trajectories.
Area of Science:
- Evolutionary biology
- Genetics
- Molecular biology
Background:
- Mutation effects change over evolutionary time due to epistasis.
- Epistatic interactions influence organismal adaptability and robustness.
- Understanding these shifts is crucial for predicting evolutionary trajectories.
Purpose of the Study:
- To review recent advances in measuring, modeling, and predicting epistasis.
- To focus on global epistasis patterns in microbial cells and single proteins.
- To highlight the potential of these patterns for predicting evolution.
Main Methods:
- Review of recent literature on epistasis measurement and modeling.
- Analysis of data from microbial cells and single proteins.
- Identification of simple global epistasis patterns.
Main Results:
- Epistatic interactions significantly alter mutation effects during evolution.
- Global epistasis patterns emerge, simplifying prediction.
- These patterns are observable in both microbial and protein systems.
Conclusions:
- Predicting evolutionary trajectories is becoming more feasible.
- Simple global epistasis patterns offer a promising framework for future research.
- Understanding epistasis is key to forecasting evolutionary adaptation and robustness.
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