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Controlling Swing Rates in Macrocyclic Molecular Mortise Hinges.

Alexander J Menke1, Joseph M Mellberg1, Hongjun Pan2

  • 1Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, TX, 76129, USA.

Chemistry (Weinheim an Der Bergstrasse, Germany)
|May 25, 2023
PubMed
Summary
This summary is machine-generated.

Molecular hinges exhibit dynamic hinge motion, transitioning between folded and extended states. Steric hindrance influences hinging speed, with glycine-based macrocycles showing faster motion than those with aminoisobutyric acid.

Keywords:
computationhingemacrocycletriazinevariable temperature NMR

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Area of Science:

  • Supramolecular Chemistry
  • Chemical Dynamics
  • Structural Biology

Background:

  • Macrocyclic compounds can form molecular hinges with dynamic properties.
  • Understanding hinge motion is crucial for designing responsive molecular systems.

Purpose of the Study:

  • To investigate the dynamic hinge motion in macrocyclic, mortise-type molecular hinges.
  • To characterize the structural and energetic parameters governing this motion.

Main Methods:

  • Variable temperature Nuclear Magnetic Resonance (NMR) spectroscopy was employed to observe hinge motion.
  • X-ray crystallography and solution-state NMR were used to determine structures.
  • Density Functional Theory (DFT) calculations were performed to elucidate the motion pathway.

Main Results:

  • Dynamic hinge motion was observed, consistent with a folded-to-extended-to-folded enantiomeric state.
  • Crystallographic data corroborated fully revolute hinge motion through chemical shift predictions.
  • Steric congestion at the hinge axis significantly affects the rate of hinging.
  • Free energies of activation (ΔG≠) were determined: 13.3±0.3 kcal/mol for glycine-containing macrocycle (1) and 16.3±0.3 kcal/mol for aminoisobutyric acid-containing macrocycle (2).
  • The energy barrier for hinging was largely solvent-independent.

Conclusions:

  • The observed hinge motion is driven by the disruption of an intramolecular hydrogen bond network.
  • DFT calculations provide a detailed pathway for the observed hinge motion.
  • The study provides insights into the design principles for controlling molecular hinge dynamics.