A pathogen effector FOLD diversified in symbiotic fungi

Albin Teulet1, Clément Quan1, Edouard Evangelisti1

  • 1Sainsbury Laboratory, University of Cambridge, Cambridge, CB2 1LR, UK.

The New Phytologist
|May 31, 2023
PubMed

Insights

Structural similarities between fungal pathogen and symbiotic arbuscular mycorrhizal (AM) fungi effectors were identified. These findings suggest conserved roles for dual domain (FOLD) proteins in plant colonization by diverse fungi.

Area of Science:

  • Mycology
  • Plant-Pathogen Interactions
  • Symbiotic Fungi

Background:

  • Pathogenic fungi secrete effector proteins to suppress host immunity.
  • Effectors are also found in symbiotic fungi, like arbuscular mycorrhizal (AM) fungi, which form nutritional symbioses with plants.
  • Sequence-based comparisons of effectors between pathogens and AM fungi are challenging due to high sequence diversity.

Purpose of the Study:

  • To identify sequence-divergent but structurally similar effector proteins shared between symbiotic and pathogenic fungi.
  • To investigate the role of dual domain (FOLD) proteins in fungal-plant interactions.

Main Methods:

  • Compared secreted protein structure models of the AM fungus Rhizophagus irregularis with known pathogen effectors.
  • Utilized structural similarity searches to identify conserved effector families.
  • Analyzed gene family expansion, diversification, and positive selection in AM fungal FOLD genes (MycFOLDs).
  • Examined MycFOLD gene expression patterns during plant colonization.

Main Results:

  • Identified MycFOLD proteins in AM fungi structurally similar to pathogen FOLD effectors.
  • MycFOLD genes are present in expanded and diversified families in AM fungi, with evidence of positive selection.
  • Structural modeling suggests MycFOLDs possess carbohydrate-binding motifs.
  • MycFOLD genes exhibit differential expression during host colonization, with MycFOLD-17 accumulating in plant arbuscules.

Conclusions:

  • MycFOLD proteins are widely distributed across unrelated plant-colonizing fungi, suggesting a conserved function.
  • Inducible expression, sequence diversification, and localization in arbuscules indicate MycFOLDs function as effectors in both symbiotic and pathogenic plant colonization.
  • FOLD proteins represent a conserved class of fungal effectors involved in plant interactions.

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