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Published on: August 28, 2019
QSAR-QSIIR-based prediction of bioconcentration factor using machine learning and preliminary application.
Jia-Yun Xu1, Kun Wang2, Shu-Hui Men1
1State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China.
A new Quantitative Structure In vitro-In vivo Relationship (QSAR-QIIR) model accurately predicts the bioconcentration factor (BCF) for multiple chemicals and species. This model aids in establishing water quality criteria for pollutants like BTEX.
Area of Science:
- Environmental Chemistry
- Toxicology
- Computational Chemistry
- Machine Learning
Background:
- Bioconcentration factor (BCF) is crucial for human health ambient water quality criteria (HHAWQC).
- Experimental BCF determination is costly and time-consuming.
- Existing Quantitative Structure-Activity Relationship (QSAR) models have limitations in scope and accuracy for diverse pollutants.
Purpose of the Study:
- To develop a robust QSAR-QIIR model for predicting BCF across multiple chemical substances and aquatic species.
- To improve the accuracy and applicability of BCF prediction models.
- To derive HHAWQC for BTEX in China using the developed model.
Main Methods:
- Selection of 17 molecular descriptors and 5 bioactivity descriptors from extensive datasets.
- Construction of a QSAR-QIIR model using an optimized 4-MLP machine learning algorithm.
- Validation of the model using verification and test sets, achieving high R2 values (0.8575 and 0.7924).
Main Results:
- The developed QSAR-QIIR model demonstrates significantly improved prediction accuracy for BCF.
- Predicted BCF values closely match measured values, with differences mostly within 1.5 times.
- BCF for BTEX in Chinese aquatic products was successfully predicted.
Conclusions:
- The novel QSAR-QIIR model offers a reliable and efficient method for BCF prediction for diverse chemicals and species.
- The model facilitates the derivation of HHAWQC, providing a valuable reference for water quality standards.
- This approach supports environmental risk assessment and regulatory development for chemical pollutants.
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