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Published on: August 15, 2019
Missense variant interaction scanning reveals a critical role of the FERM domain for tumor suppressor protein NF2
Christina S Moesslacher1, Elisabeth Auernig1, Jonathan Woodsmith1
1Institute of Pharmaceutical Sciences, Pharmaceutical Chemistry, University of Graz, Graz, Austria.
Abstract:
NF2 (moesin-ezrin-radixin-like [MERLIN] tumor suppressor) is frequently inactivated in cancer, where its NF2 tumor suppressor functionality is tightly coupled to protein conformation. How NF2 conformation is regulated and how NF2 conformation influences tumor suppressor activity is a largely open question. Here, we systematically characterized three NF2 conformation-dependent protein interactions utilizing deep mutational scanning interaction perturbation analyses. We identified two regions in NF2 with clustered mutations which affected conformation-dependent protein interactions. NF2 variants in the F2-F3 subdomain and the α3H helix region substantially modulated NF2 conformation and homomerization. Mutations in the F2-F3 subdomain altered proliferation in three cell lines and matched patterns of disease mutations in NF2 related-schwannomatosis. This study highlights the power of systematic mutational interaction perturbation analysis to identify missense variants impacting NF2 conformation and provides insight into NF2 tumor suppressor function.
Insights
The NF2 tumor suppressor protein
Area of Science:
- Oncogenic pathways and molecular mechanisms of cancer development.
Background:
- The NF2 tumor suppressor protein, also known as moesin-ezrin-radixin-like (MERLIN), plays a crucial role in preventing cancer, but its function is linked to its specific protein shape (conformation).
- Understanding how NF2's shape is controlled and how this affects its tumor-suppressing ability is essential but largely unknown.
Purpose of the Study:
- To systematically investigate how changes in NF2 protein shape affect its interactions with other proteins.
- To identify specific regions within NF2 that control its shape and influence its tumor suppressor activity.
Main Methods:
- Utilized deep mutational scanning and interaction perturbation analyses to examine multiple NF2 protein interactions simultaneously.
- Systematically mutated the NF2 protein and analyzed the impact on protein interactions and conformation.
Main Results:
- Identified two key regions in NF2 (F2-F3 subdomain and α3H helix) where mutations significantly altered protein conformation and self-association (homomerization).
- Mutations in the F2-F3 subdomain affected cell growth and mirrored mutations found in patients with NF2-related schwannomatosis.
- Discovered specific NF2 variants that impact conformation-dependent interactions.
Conclusions:
- Systematic mutational analysis is a powerful tool for identifying genetic variants that disrupt NF2 conformation and function.
- This research provides new insights into how NF2's shape regulates its tumor suppressor activity, potentially informing future cancer therapies.
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