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Updated: Jan 18, 2026

Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
Published on: September 20, 2018
Epigenetic dysregulation from chromosomal transit in micronuclei
Albert S Agustinus1,2, Duaa Al-Rawi1,3, Bhargavi Dameracharla4
1Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Abstract:
Chromosomal instability (CIN) and epigenetic alterations are characteristics of advanced and metastatic cancers1-4, but whether they are mechanistically linked is unknown. Here we show that missegregation of mitotic chromosomes, their sequestration in micronuclei5,6 and subsequent rupture of the micronuclear envelope7 profoundly disrupt normal histone post-translational modifications (PTMs), a phenomenon conserved across humans and mice, as well as in cancer and non-transformed cells. Some of the changes in histone PTMs occur because of the rupture of the micronuclear envelope, whereas others are inherited from mitotic abnormalities before the micronucleus is formed. Using orthogonal approaches, we demonstrate that micronuclei exhibit extensive differences in chromatin accessibility, with a strong positional bias between promoters and distal or intergenic regions, in line with observed redistributions of histone PTMs. Inducing CIN causes widespread epigenetic dysregulation, and chromosomes that transit in micronuclei experience heritable abnormalities in their accessibility long after they have been reincorporated into the primary nucleus. Thus, as well as altering genomic copy number, CIN promotes epigenetic reprogramming and heterogeneity in cancer.
Insights
Chromosomal instability (CIN) causes micronuclei formation, which disrupts histone modifications and chromatin accessibility. This epigenetic reprogramming contributes to cancer cell heterogeneity and progression.
Area of Science:
- Cell Biology
- Genetics
- Cancer Research
Background:
- Chromosomal instability (CIN) and epigenetic alterations are hallmarks of advanced and metastatic cancers.
- The mechanistic link between CIN and epigenetic changes remains largely unknown.
Purpose of the Study:
- To investigate the mechanistic link between chromosomal instability and epigenetic alterations in cancer.
- To determine if micronuclei formation disrupts histone post-translational modifications (PTMs) and chromatin accessibility.
Main Methods:
- Utilized orthogonal approaches to analyze histone PTMs and chromatin accessibility in cells with induced CIN and micronuclei.
- Examined the impact of micronuclear envelope rupture on histone PTMs.
- Assessed the heritability of epigenetic abnormalities after micronuclei reincorporation.
Main Results:
- Micronuclei formation and rupture profoundly disrupt normal histone PTMs, a conserved phenomenon across species and cell types.
- Micronuclei exhibit significant differences in chromatin accessibility with a positional bias.
- CIN induces widespread epigenetic dysregulation, and chromosomes within micronuclei experience heritable accessibility defects.
Conclusions:
- CIN promotes epigenetic reprogramming and cellular heterogeneity in cancer through disruption of histone PTMs and chromatin accessibility.
- Micronuclei formation is a key driver of epigenetic dysregulation in cancer.
- Understanding this link offers new avenues for cancer therapy targeting epigenetic vulnerabilities.
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