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Related Experiment Video

Updated: Jul 27, 2025

Conformational Evaluation of HIV-1 Trimeric Envelope Glycoproteins Using a Cell-based ELISA Assay
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Microsecond dynamics control the HIV-1 envelope conformation.

Ashley L Bennett1, R J Edwards1, Irina Kosheleva2

  • 1Duke Human Vaccine Institute, Duke University Medical Center, Durham, NC 27710, USA.

Biorxiv : the Preprint Server for Biology
|June 9, 2023
PubMed
Summary
This summary is machine-generated.

Researchers observed rapid microsecond-scale structural changes in the HIV-1 Envelope (Env) glycoprotein, revealing a key intermediate state before opening. This finding suggests new strategies for designing effective HIV vaccines by targeting these early transitions.

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Determination of Molecular Structures of HIV Envelope Glycoproteins using Cryo-Electron Tomography and Automated Sub-tomogram Averaging
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Determination of Molecular Structures of HIV Envelope Glycoproteins using Cryo-Electron Tomography and Automated Sub-tomogram Averaging
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Area of Science:

  • Structural biology
  • Virology
  • Biophysics

Background:

  • The Human Immunodeficiency Virus type 1 (HIV-1) Envelope (Env) glycoprotein mediates viral entry by undergoing significant conformational changes upon receptor binding.
  • Understanding the dynamic structural transitions of Env is crucial for developing effective vaccines and therapeutics.
  • Previous studies have characterized millisecond-timescale events, but faster microsecond-timescale dynamics remain largely unexplored.

Approach:

  • Utilized time-resolved, temperature-jump small-angle X-ray scattering (TR-TJ-SAXS) to probe structural rearrangements of an HIV-1 Env ectodomain construct.
  • Achieved microsecond precision to capture rapid dynamic events previously inaccessible.
  • Employed model fitting to interpret observed structural transitions.

Key Points:

  • Detected two distinct structural transitions in the microsecond timescale preceding Env opening.
  • Identified an early, rapid order-to-disorder transition in trimer apex loop contacts.
  • Demonstrated that this early transition may bypass conventional allosteric locking mechanisms.

Conclusions:

  • The rapid dynamics of the HIV-1 Env ectodomain, particularly in the trimer apex loop, represent a critical intermediate state.
  • Engineered an Env construct to stabilize apex loop contacts, altering antibody binding orientation.
  • Blocking these early intermediate states offers a promising strategy for eliciting broadly neutralizing antibodies for HIV vaccination.