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Updated: Jul 27, 2025

Autofluorescence Imaging to Evaluate Red Algae Physiology
Published on: February 17, 2023
AI facilitated fluoro-electrochemical phytoplankton classification
Haotian Chen1, Samuel Barton2, Minjun Yang1
1Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford South Parks Road Oxford OX1 3QZ UK richard.compton@chem.ox.ac.uk.
Abstract:
Marine phytoplankton is extremely diverse. Counting and characterising phytoplankton is essential for understanding climate change and ocean health not least since phytoplankton extensively biomineralize carbon dioxide whilst generating 50% of the planet's oxygen. We report the use of fluoro-electrochemical microscopy to distinguish different taxonomies of phytoplankton by the quenching of their chlorophyll-a fluorescence using chemical species oxidatively electrogenerated in situ in seawater. The rate of chlorophyll-a quenching of each cell is characteristic of the species-specific structural composition and cellular content. But with increasing diversity and extent of phytoplankton species under study, human interpretation and distinction of the resulting fluorescence transients becomes increasingly and prohibitively difficult. Thus, we further report a neural network to analyse these fluorescence transients, with an accuracy >95% classifying 29 phytoplankton strains to their taxonomic orders. This method transcends the state-of-the-art. The success of the fluoro-electrochemical microscopy combined with AI provides a novel, flexible and highly granular solution to phytoplankton classification and is adaptable for autonomous ocean monitoring.
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