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Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation
Published on: June 21, 2016
RXR agonist, Bexarotene, effectively reduces drug resistance via regulation of RFX1 in embryonic carcinoma cells
Joby Issac1, Pooja S Raveendran2, Midhunaraj Kunnummal2
1Cancer Research Program-12, Rajiv Gandhi Centre for Biotechnology (DBT-RGCB), Thycaud. P.O. Thiruvananthapuram-14, Kerala, India.
Abstract:
Aberrant expression of multidrug resistance (MDR) proteins is one of the features of cancer stem cells (CSCs) that make them escape chemotherapy. A well-orchestrated regulation of multiple MDRs by different transcription factors in cancer cells confers this drug resistance. An in silico analysis of the major MDR genes revealed a possible regulation by RFX1 and Nrf2. Previous reports also noted that Nrf2 is a positive regulator of MDR genes in NT2 cells. But we, for the first time, report that Regulatory factor X1 (RFX1), a pleiotropic transcription factor, negatively regulates the major MDR genes, Abcg2, Abcb1, Abcc1, and Abcc2, in NT2 cells. The levels of RFX1 in undifferentiated NT2 cells were found to be very low, which significantly increased upon RA-induced differentiation. Ectopic expression of RFX1 reduced the levels of transcripts corresponding to MDRs and stemness-associated genes. Interestingly, Bexarotene, an RXR agonist that acts as an inhibitor of Nrf2-ARE signaling, could increase the transcription of RFX1. Further analysis revealed that the RFX1 promoter has binding sites for RXRα, and upon Bexarotene exposure RXRα could bind and activate the RFX1 promoter. Bexarotene, alone or in combination with Cisplatin, could inhibit many cancer/CSC-associated properties in NT2 cells. Also, it significantly reduced the expression of drug resistance proteins and made the cells sensitive towards Cisplatin. Our study proves that RFX1 could be a potent molecule to target MDRs, and Bexarotene can induce RXRα-mediated RFX1 expression, therefore, would be a better chemo-assisting drug during therapy.
Insights
Regulatory factor X1 (RFX1) inhibits multidrug resistance (MDR) genes in cancer stem cells (CSCs). Bexarotene, a drug, boosts RFX1, enhancing chemotherapy effectiveness against drug-resistant cancers.
Area of Science:
- Cancer Biology
- Molecular Oncology
- Drug Resistance Mechanisms
Background:
- Multidrug resistance (MDR) proteins in cancer stem cells (CSCs) enable chemotherapy escape.
- Transcription factors regulate MDR genes, contributing to drug resistance.
- Nrf2 is a known positive regulator of MDR genes in NT2 cells.
Purpose of the Study:
- To investigate the role of Regulatory factor X1 (RFX1) in regulating MDR genes in NT2 cells.
- To explore the effect of Bexarotene on RFX1 expression and its impact on CSC properties and drug sensitivity.
Main Methods:
- In silico analysis of MDR genes.
- Assessing RFX1 levels during NT2 cell differentiation.
- Ectopic expression of RFX1.
- Investigating Bexarotene's effect on RFX1 promoter activity via RXRα binding.
- Evaluating Bexarotene's efficacy alone and with Cisplatin on cancer/CSC properties and drug sensitivity.
Main Results:
- RFX1 negatively regulates major MDR genes (Abcg2, Abcb1, Abcc1, Abcc2) in NT2 cells.
- RFX1 levels increase upon RA-induced differentiation and ectopic RFX1 expression reduces MDR and stemness genes.
- Bexarotene, an RXR agonist, increases RFX1 transcription by activating its promoter via RXRα.
- Bexarotene treatment reduces drug resistance, enhances Cisplatin sensitivity, and inhibits cancer/CSC properties.
Conclusions:
- RFX1 is a novel negative regulator of MDR genes and a potential therapeutic target.
- Bexarotene induces RXRα-mediated RFX1 expression, positioning it as a potential chemo-assisting drug.
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