Plant virus movement proteins originated from jelly-roll capsid proteins
Anamarija Butkovic1, Valerian V Dolja2, Eugene V Koonin3
1Institut Pasteur, Université Paris Cité, CNRS UMR6047, Archaeal Virology Unit, Paris, France.
Abstract:
Numerous, diverse plant viruses encode movement proteins (MPs) that aid the virus movement through plasmodesmata, the plant intercellular channels. MPs are essential for virus spread and propagation in distal tissues, and several unrelated MPs have been identified. The 30K superfamily of MPs (named after the molecular mass of tobacco mosaic virus MP, the classical model of plant virology) is the largest and most diverse MP variety, represented in 16 virus families, but its evolutionary origin remained obscure. Here, we show that the core structural domain of the 30K MPs is homologous to the jelly-roll domain of the capsid proteins (CPs) of small RNA and DNA viruses, in particular, those infecting plants. The closest similarity was observed between the 30K MPs and the CPs of the viruses in the families Bromoviridae and Geminiviridae. We hypothesize that the MPs evolved via duplication or horizontal acquisition of the CP gene in a virus that infected an ancestor of vascular plants, followed by neofunctionalization of one of the paralogous CPs, potentially through the acquisition of unique N- and C-terminal regions. During the subsequent coevolution of viruses with diversifying vascular plants, the 30K MP genes underwent explosive horizontal spread among emergent RNA and DNA viruses, likely permitting viruses of insects and fungi that coinfected plants to expand their host ranges, molding the contemporary plant virome.
Insights
Plant virus movement proteins (MPs) evolved from capsid proteins (CPs), sharing homologous structural domains. This discovery sheds light on the origin and spread of plant viruses.
Area of Science:
- Plant virology
- Molecular evolution
- Structural biology
Background:
- Plant viruses utilize movement proteins (MPs) to spread between cells via plasmodesmata.
- The 30K superfamily represents the largest and most diverse group of MPs, crucial for systemic virus propagation.
- The evolutionary origins of 30K MPs remained largely unknown.
Purpose of the Study:
- To investigate the evolutionary origin of the 30K superfamily of plant virus movement proteins.
- To identify homologous structural domains between MPs and other viral proteins.
Main Methods:
- Comparative structural analysis of 30K MPs and viral capsid proteins (CPs).
- Bioinformatic analysis to identify homologous domains and evolutionary relationships.
Main Results:
- The core structural domain of 30K MPs is homologous to the jelly-roll domain of small RNA and DNA virus CPs.
- The closest similarity was found between 30K MPs and CPs from viruses in the Bromoviridae and Geminiviridae families.
- A hypothesis for MP evolution via gene duplication or horizontal gene transfer of CP is proposed.
Conclusions:
- 30K MPs likely originated from capsid proteins through gene duplication or horizontal acquisition in an ancestral plant virus.
- Subsequent neofunctionalization and horizontal gene spread among diverse viruses shaped the current plant virome.
- This evolutionary pathway highlights the dynamic nature of virus-host interactions and viral genome evolution.
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