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Developments in the classification and nomenclature of arthropod-infecting large DNA viruses that contain pif genes
Monique M van Oers1, Elisabeth A Herniou2, Johannes A Jehle3
1Laboratory of Virology, Wageningen University and Research, Wageningen, the Netherlands. monique.vanoers@wur.nl.
Abstract:
Viruses of four families of arthropod-specific, large dsDNA viruses (the nuclear arthropod large DNA viruses, or NALDVs) possess homologs of genes encoding conserved components involved in the baculovirus primary infection mechanism. The presence of such homologs encoding per os infectivity factors (pif genes), along with their absence from other viruses and the occurrence of other shared characteristics, suggests a common origin for the viruses of these families. Therefore, the class Naldaviricetes was recently established, accommodating these four families. In addition, within this class, the ICTV approved the creation of the order Lefavirales for three of these families, whose members carry homologs of the baculovirus genes that code for components of the viral RNA polymerase, which is responsible for late gene expression. We further established a system for the binomial naming of all virus species in the order Lefavirales, in accordance with a decision by the ICTV in 2019 to move towards a standardized nomenclature for all virus species. The binomial species names for members of the order Lefavirales consist of the name of the genus to which the species belongs (e.g., Alphabaculovirus), followed by a single epithet that refers to the host species from which the virus was originally isolated. The common names of viruses and the abbreviations thereof will not change, as the format of virus names lies outside the remit of the ICTV.
Insights
Nuclear arthropod large DNA viruses (NALDVs) share key genes with baculoviruses, suggesting a common origin. A new classification, the order Lefavirales, and a binomial naming system for these arthropod viruses have been established.
Area of Science:
- Virology
- Molecular Biology
- Taxonomy
Background:
- Arthropod-specific large dsDNA viruses, known as NALDVs, exhibit genetic similarities to baculoviruses.
- Homologs of baculovirus per os infectivity factors (pif genes) are present in NALDVs, indicating a shared evolutionary path.
Purpose of the Study:
- To establish a new taxonomic classification for NALDVs based on shared genetic characteristics.
- To implement a standardized binomial nomenclature system for newly classified virus species.
Main Methods:
- Comparative genomics analysis of NALDVs and baculoviruses.
- Review of existing viral taxonomy and nomenclature guidelines by the ICTV.
Main Results:
- The class Naldaviricetes was created to accommodate four families of NALDVs.
- The order Lefavirales was established within Naldaviricetes for three families possessing baculovirus RNA polymerase gene homologs.
- A binomial naming system was implemented for Lefavirales species, using genus name and host epithet.
Conclusions:
- NALDVs likely share a common ancestor with baculoviruses, supported by conserved infection mechanism genes.
- The establishment of Naldaviricetes and Lefavirales provides a refined taxonomic framework for these viruses.
- Standardized binomial nomenclature enhances clarity and consistency in naming Lefavirales virus species.
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