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Inferring landscape resistance to gene flow when genetic drift is spatially heterogeneous
Paul Savary1,2,3, Jean-Christophe Foltête2, Hervé Moal1
1ARP-Astrance, Paris, France.
Molecular Ecology Resources
|June 19, 2023
Summary
Landscape genetics reliably ranks resistance costs but struggles to identify true values when migration is low or populations are heterogeneous. Incorporating population size and area improves cost inference accuracy.
Area of Science:
- Ecology
- Population Genetics
- Conservation Biology
Background:
- Connectivity models use land cover costs to estimate species movement resistance.
- Landscape genetics infers these costs from genetic differentiation and cost distances.
- Spatial heterogeneity in population size (drift), migration, and distribution is often overlooked in cost inference.
Purpose of the Study:
- To assess the reliability of cost value inference under varying migration rates, population spatial patterns, and population size heterogeneity.
- To evaluate if incorporating intra-population variables (e.g., gravity models) improves inference accuracy, especially with heterogeneous genetic drift.
- To identify conditions enabling the accurate identification of true landscape resistance costs.
Main Methods:
- Simulated gene flow between populations with diverse sizes and spatial distributions.
- Fitted gravity models using true/alternative cost distances and intra-population variables (population sizes, patch areas).
- Assessed inference reliability using Mantel correlations between cost distances and identified conditions for accurate cost identification.
Main Results:
- Cost scenario ranking was generally reliable, but the true cost scenario rarely yielded the best model fit.
- Inference inaccuracies increased with restricted migration (<4 dispersal events/generation), high population size heterogeneity, and population aggregation.
- Considering intra-population variables significantly improved the reliable identification of true cost scenarios in challenging situations.
Conclusions:
- Standard landscape genetic inference of resistance costs can be unreliable under realistic demographic complexities.
- Incorporating intra-population variables like population size and area is crucial for accurate cost inference when genetic drift is spatially heterogeneous.
- Improved cost inference enhances the effectiveness of connectivity models for conservation planning and species management.
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