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Updated: Jul 26, 2025

Sample Drift Correction Following 4D Confocal Time-lapse Imaging
Published on: April 12, 2014
Retrospective frequency drift correction of rosette MRSI data using spectral registration
Sneha Senthil1, Brenden Kadota2,3, Peter Truong3
1Integrated Program in Neuroscience, McGill University, Montreal, Quebec, Canada.
Purpose:
Frequency drift correction is an important postprocessing step in MRS that yields improvements in spectral quality and metabolite quantification. Although routinely applied in single-voxel MRS, drift correction is much more challenging in MRSI due to the presence of phase-encoding gradients. Thus, separately acquired navigator scans are normally required for drift estimation. In this work, we demonstrate the use of self-navigating rosette MRSI trajectories combined with time-domain spectral registration to enable retrospective frequency drift corrections without the need for separately acquired navigator echoes.
Methods:
A rosette MRSI sequence was implemented to acquire data from the brains of 5 healthy volunteers. FIDs from the center of k-space ( FIDs) were isolated from each shot of the rosette acquisition, and time-domain spectral registration was used to estimate the frequency offset of each FID relative to a reference scan (the first FID in the series). The estimated frequency offsets were then used to apply corrections throughout -space. Improvements in spectral quality were assessed before and after drift correction.
Results:
Spectral registration resulted in significant improvements in signal-to-noise ratio (12.9%) and spectral linewidths (18.5%). Metabolite quantification was performed using LCModel, and the average Cramer-Rao lower bounds uncertainty estimates were reduced by 5.0% for all metabolites, following field drift correction.
Conclusion:
This study demonstrated the use of self-navigating rosette MRSI trajectories to retrospectively correct frequency drift errors in in vivo MRSI data. This correction yields meaningful improvements in spectral quality.
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