Alteration of DNMT1/DNMT3A by eribulin elicits global DNA methylation changes with potential therapeutic implications

Meisam Bagheri1,2, Min Kyung Lee3, Kristen E Muller2,4

  • 1Department of Molecular and Systems Biology, Geisel School of Medicine at Dartmouth, Lebanon, NH 03766.

Insights

Eribulin treatment alters DNA methylation patterns in triple-negative breast cancer (TNBC) cells, affecting gene expression and cellular pathways. This epigenetic modulation offers potential new therapeutic strategies for TNBC.

Area of Science:

  • Oncology
  • Epigenetics
  • Molecular Biology

Background:

  • Triple-negative breast cancer (TNBC) is an aggressive subtype with limited therapeutic options.
  • Eribulin, a chemotherapeutic agent, is approved for advanced breast cancer and known to induce epigenetic modifications.
  • Understanding eribulin's impact on TNBC epigenetics is crucial for developing novel treatment strategies.

Approach:

  • Investigated genome-scale DNA methylation patterns in TNBC cells following repeated eribulin treatment.
  • Analyzed changes in transcription factor binding, specifically at ZEB1 sites.
  • Examined the expression of key epigenetic modifiers, including DNMT1, TET1, and DNMT3A/B.
  • Validated findings in primary human TNBC tumors.

Key Points:

  • Eribulin treatment induced significant changes in DNA methylation patterns in TNBC persister cells.
  • Eribulin affected transcription factor binding and regulated critical cellular pathways like ERBB and VEGF signaling.
  • The drug altered the expression of epigenetic modifiers (DNMT1, TET1, DNMT3A/B) in TNBC cells and human tumors.

Conclusions:

  • Eribulin modulates DNA methylation in TNBC by altering the expression of epigenetic modifiers.
  • These findings highlight the potential clinical utility of eribulin in TNBC therapy.
  • Eribulin's epigenetic effects provide a mechanistic basis for its efficacy in treating TNBC.

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