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Bagged filters for partially observed interacting systems.

Edward L Ionides1, Kidus Asfaw1, Joonha Park2

  • 1Department of Statistics, University of Michigan.

Journal of the American Statistical Association
|June 19, 2023
PubMed
Summary
This summary is machine-generated.

Bagged filter (BF) methodology improves inference for interacting dynamic systems by combining multiple filters. This approach overcomes the curse of dimensionality in complex models, outperforming existing methods in epidemiological simulations.

Keywords:
Markov processParticle filterPopulation dynamicsSequential Monte Carlo

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Area of Science:

  • Computational statistics
  • Stochastic modeling
  • Epidemiological modeling

Background:

  • Bagging (bootstrap aggregating) combines multiple estimators for improved inference.
  • Stochastic dynamic systems with interacting units pose computational challenges, especially in high dimensions.
  • Monte Carlo filtering methods struggle with the curse of dimensionality in nonlinear, non-Gaussian systems.

Purpose of the Study:

  • To introduce a novel bagged filter (BF) methodology for inference in interacting stochastic dynamic systems.
  • To address the curse of dimensionality in complex systems, particularly in spatiotemporal modeling.
  • To evaluate the performance of BF against existing filtering techniques.

Main Methods:

  • Ensemble of Monte Carlo filters combined using spatiotemporally localized weights.
  • Selection of successful filters at each unit and time point.
  • Application to coupled population dynamics models for infectious disease transmission.

Main Results:

  • Bagged filter (BF) methodology effectively handles inference for noisy or incomplete data in interacting systems.
  • BF can overcome the curse of dimensionality under specific conditions and demonstrates applicability even when these conditions are not met.
  • BF outperformed an ensemble Kalman filter in a coupled population dynamics model.

Conclusions:

  • Bagged filter (BF) provides a robust and scalable approach for inference in complex interacting stochastic systems.
  • BF offers advantages over traditional methods by mitigating the curse of dimensionality and preserving system properties.
  • The methodology shows significant potential for applications in fields like epidemiology.