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Complete Genome Sequence of Sphingomonas sp. Strain NIBR02145
Hyun Young Kim1,2, Jin Young Park3, Jin Nam Kim4
1Department of Oral Microbiology and Immunology, School of Dentistry, Seoul National University, Seoul, Republic of Korea.
Microbiology Resource Announcements
|June 22, 2023
Summary
The genome of Sphingomonas sp. strain NIBR02145, isolated from Korean soil, was sequenced. This chemoheterotrophic bacterium
Area of Science:
- Microbiology
- Genomics
- Environmental Science
Background:
- Sphingomonas species are known for their metabolic versatility and presence in diverse environments.
- Soil microorganisms play crucial roles in nutrient cycling and ecosystem health.
Purpose of the Study:
- To perform whole-genome sequencing of Sphingomonas sp. strain NIBR02145.
- To characterize the genomic features of a novel soil-isolated bacterium.
Main Methods:
- Isolation of Sphingomonas sp. strain NIBR02145 from soil in Wando-gun, Republic of Korea.
- Whole-genome sequencing using PacBio next-generation sequencing technology.
Main Results:
- The complete genome of Sphingomonas sp. strain NIBR02145 is a circular DNA molecule of 5,010,245 base pairs.
- The genome exhibits a GC content of 66.79% and contains 4,561 coding sequences, 6 rRNA genes, and 52 tRNA genes.
Conclusions:
- The genome sequence provides a foundation for understanding the metabolic capabilities and ecological role of Sphingomonas sp. strain NIBR02145.
- This genomic data contributes to the broader knowledge of microbial diversity in Korean soils.
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