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Updated: Jul 25, 2025

High Resolution Whole Mount In Situ Hybridization within Zebrafish Embryos to Study Gene Expression and Function
Published on: October 19, 2013
Inversin (NPHP2) and Vangl2 are required for normal zebrafish cloaca formation
Hui Wang1, Friedemann Zaiser1, Priska Eckert1
1Renal Division, University Freiburg Medical Center, Faculty of Medicine, University of Freiburg, Germany.
Nephronophthisis (NPH) is a ciliopathy linked to gene mutations. Zebrafish studies reveal NPHP1, NPHP2/Inversin, and VANGL2 are crucial for cloaca formation, with apoptosis playing a key role.
Area of Science:
- Genetics and Developmental Biology
- Cell Biology
- Molecular Medicine
Background:
- Nephronophthisis (NPH) is an autosomal recessive ciliopathy caused by mutations in over 20 NPHPs genes.
- NPHP gene products regulate ciliary trafficking and have extraciliary functions, including planar cell polarity (PCP) signaling.
- NPHP2/Inversin is implicated in both primary cilia structure and PCP signaling pathways.
Purpose of the Study:
- To characterize the tissue-specific functions of zebrafish Nphp2 using the invssa36157 mutant line.
- To investigate the interplay between NPHP genes and PCP pathway members in zebrafish development.
- To elucidate the molecular mechanisms underlying NPH-associated phenotypes, particularly cloaca malformations.
Main Methods:
- Utilized the zebrafish mutant line invssa36157 with a premature stop codon in NPHP2.
- Employed morpholino-mediated knockdown to deplete nphp1 and vangl2 in zebrafish embryos.
- Performed time-lapse imaging and in situ hybridization to analyze cell migration, tissue development, and apoptosis.
Main Results:
- Zebrafish invssa36157 mutants displayed mild ciliopathy, increased glomerular and cloaca cyst formation, and susceptibility to nphp1/nphp2/nphp8 module depletion.
- Simultaneous depletion of nphp1 and vangl2 in invssa36157 mutants significantly increased cloaca malformations, with cells failing to form the cloaca opening despite correct migration.
- Reduced apoptotic activity was observed in double knockdown embryos, indicating a role for apoptosis in cloacal morphogenesis.
Conclusions:
- NPHP1, NPHP2/Inversin, and VANGL2 are critical for normal cloaca formation in zebrafish.
- The study highlights the complex interplay of ciliopathy genes and PCP signaling in epithelial development.
- Findings provide insights into the molecular mechanisms underlying ciliopathy phenotypes and associated developmental defects.
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