Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Electronic Structure of Atoms02:28

Electronic Structure of Atoms

22.5K

An atom comprises protons and neutrons, which are contained inside the dense, central core called the nucleus, with electrons present around the nucleus. Taking into account the wave–particle duality of electrons and the uncertainty in position around the nucleus, quantum mechanics provides a more accurate model for the atomic structure. It describes atomic orbitals as the regions around the nucleus where electrons of discrete energy exist, characterized by four quantum...
22.5K
Electron Configuration of Multielectron Atoms03:26

Electron Configuration of Multielectron Atoms

44.0K
The alkali metal sodium (atomic number 11) has one more electron than the neon atom. This electron must go into the lowest-energy subshell available, the 3s orbital, giving a 1s22s22p63s1 configuration. The electrons occupying the outermost shell orbital(s) (highest value of n) are called valence electrons, and those occupying the inner shell orbitals are called core electrons. Since the core electron shells correspond to noble gas electron configurations, we can abbreviate electron...
44.0K
VSEPR Theory02:37

VSEPR Theory

9.6K
Valence shell electron-pair repulsion theory (VSEPR theory) enables us to predict the molecular structure around a central atom from an examination of the number of bonds and lone electron pairs in its Lewis structure. The VSEPR model assumes that electron pairs in the valence shell of a central atom will adopt an arrangement that minimizes repulsions between these electron pairs by maximizing the distance between them. The electrons in the valence shell of a central atom form either bonding...
9.6K
Electron Orbital Model01:18

Electron Orbital Model

68.0K
Orbitals are the areas outside of the atomic nucleus where electrons are most likely to reside. They are characterized by different energy levels, shapes, and three-dimensional orientations. The location of electrons is described most generally by a shell or principal energy level, then by a subshell within each shell, and finally, by individual orbitals found within the subshells.
The first shell is closest to the nucleus, and it has only one subshell with a single spherical orbital called the...
68.0K
The Quantum-Mechanical Model of an Atom02:45

The Quantum-Mechanical Model of an Atom

42.6K
Shortly after de Broglie published his ideas that the electron in a hydrogen atom could be better thought of as being a circular standing wave instead of a particle moving in quantized circular orbits, Erwin Schrödinger extended de Broglie’s work by deriving what is now known as the Schrödinger equation. When Schrödinger applied his equation to hydrogen-like atoms, he was able to reproduce Bohr’s expression for the energy and, thus, the Rydberg formula governing hydrogen spectra.
42.6K
The Aufbau Principle and Hund's Rule03:02

The Aufbau Principle and Hund's Rule

51.7K
To determine the electron configuration for any particular atom, we can build the structures in the order of atomic numbers. Beginning with hydrogen, and continuing across the periods of the periodic table, we add one proton at a time to the nucleus and one electron to the proper subshell until we have described the electron configurations of all the elements. This procedure is called the aufbau principle, from the German word aufbau (“to build up”). Each added electron occupies the...
51.7K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Real-Space Stochastic <i>GW</i> Calculations Benchmark on GW20.

Journal of chemical theory and computation·2026
Same author

Decoding atomic landscapes: Integrating electronic structure theory and high-resolution atomic force microscopy.

The Journal of chemical physics·2026
Same author

Anisotropy and isotope effect in superconducting solid hydrogen.

Journal of physics. Condensed matter : an Institute of Physics journal·2023
Same author

Observation of electron orbital signatures of single atoms within metal-phthalocyanines using atomic force microscopy.

Nature communications·2023
Same author

Accelerating the discovery of novel magnetic materials using machine learning-guided adaptive feedback.

Proceedings of the National Academy of Sciences of the United States of America·2022
Same author

Magnetism and interlayer bonding in pores of Bernal-stacked hexagonal boron nitride.

Physical chemistry chemical physics : PCCP·2022

Related Experiment Video

Updated: Jul 25, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.2K

Real-space solution to the electronic structure problem for nearly a million electrons.

Mehmet Dogan1, Kai-Hsin Liou2, James R Chelikowsky1,2,3

  • 1Center for Computational Materials, Oden Institute for Computational Engineering and Sciences, University of Texas at Austin, Austin, Texas 78712, USA.

The Journal of Chemical Physics
|June 27, 2023
PubMed
Summary
This summary is machine-generated.

We used Kohn-Sham density functional theory to simulate large silicon nanoclusters with over 200,000 atoms. This study demonstrates the real-space approach

More Related Videos

Excitonic Hamiltonians for Calculating Optical Absorption Spectra and Optoelectronic Properties of Molecular Aggregates and Solids
08:04

Excitonic Hamiltonians for Calculating Optical Absorption Spectra and Optoelectronic Properties of Molecular Aggregates and Solids

Published on: May 27, 2020

8.5K
Probe Type II Band Alignment in One-Dimensional Van Der Waals Heterostructures Using First-Principles Calculations
13:56

Probe Type II Band Alignment in One-Dimensional Van Der Waals Heterostructures Using First-Principles Calculations

Published on: October 12, 2019

7.7K

Related Experiment Videos

Last Updated: Jul 25, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.2K
Excitonic Hamiltonians for Calculating Optical Absorption Spectra and Optoelectronic Properties of Molecular Aggregates and Solids
08:04

Excitonic Hamiltonians for Calculating Optical Absorption Spectra and Optoelectronic Properties of Molecular Aggregates and Solids

Published on: May 27, 2020

8.5K
Probe Type II Band Alignment in One-Dimensional Van Der Waals Heterostructures Using First-Principles Calculations
13:56

Probe Type II Band Alignment in One-Dimensional Van Der Waals Heterostructures Using First-Principles Calculations

Published on: October 12, 2019

7.7K

Area of Science:

  • Computational materials science
  • Quantum chemistry
  • Condensed matter physics

Background:

  • Investigating the electronic structure of large nanoclusters is crucial for understanding their properties.
  • Previous methods were limited in scalability for systems with a high number of atoms and electrons.

Purpose of the Study:

  • To perform a large-scale Kohn-Sham density functional theory (KS-DFT) calculation on a silicon nanocluster.
  • To demonstrate the efficiency of the real-space approach for electronic structure calculations on high-performance computing platforms.

Main Methods:

  • Utilized a real-space, high-order finite-difference method for KS-DFT.
  • Employed Chebyshev-filtered subspace iteration for faster eigenspace convergence.
  • Implemented blockwise Hilbert space-filling curves for sparse matrix-vector multiplications within the PARSEC code.
  • Replaced the orthonormalization + Rayleigh-Ritz step with a generalized eigenvalue problem.

Main Results:

  • Successfully calculated the electronic structure of a 20 nm spherical silicon nanocluster (202,617 silicon atoms, 13,836 hydrogen atoms).
  • Achieved two Chebyshev-filtered subspace iterations, providing a good approximation of the electronic density of states.
  • Demonstrated the scalability of the real-space approach, pushing the limits to nearly 10^6 electrons.

Conclusions:

  • The real-space approach is highly effective for large-scale electronic structure calculations.
  • This work highlights the potential of modern high-performance computing for tackling complex materials science problems.
  • The developed methods enable efficient parallelization for future investigations of large atomic systems.