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Deep Learning- and Expert Knowledge-Based Feature Extraction and Performance Evaluation in Breast Histopathology
Hepseeba Kode1, Buket D Barkana2
1Computer Science and Engineering Department, University of Bridgeport, Bridgeport, CT 06604, USA.
A knowledge-based system achieved 98% accuracy in breast cancer diagnosis using histopathology images, outperforming deep learning methods like Convolutional Neural Networks (CNNs) and VGG16.
Area of Science:
- Oncology
- Medical Imaging
- Computer Science
Background:
- Cancer diagnosis relies on analyzing histopathology images to detect abnormal cell growth.
- Computer-aided detection (CAD) systems using knowledge-based or deep learning approaches are crucial for enhancing diagnostic accuracy.
- Effective feature extraction from histopathology images is essential for the performance of CAD systems.
Purpose of the Study:
- To evaluate and compare the performance of three distinct feature extraction methods for breast cancer diagnosis.
- To assess the efficacy of Convolutional Neural Networks (CNNs), VGG16 transfer learning, and a knowledge-based system in identifying cancerous tissues.
- To determine the optimal feature extraction technique when combined with various classification algorithms.
Main Methods:
- Three feature extraction techniques were employed: a Convolutional Neural Network (CNN), the VGG16 transfer learning architecture, and a knowledge-based system.
- Extracted features were tested using seven different classifiers: Neural Network (64 units), Random Forest, Multilayer Perceptron, Decision Tree, Support Vector Machines, K-Nearest Neighbors, and Narrow Neural Network (10 units).
- The BreakHis 400× histopathology image dataset was utilized for performance evaluation.
Main Results:
- The CNN method achieved a maximum accuracy of 85% when paired with Neural Network and Random Forest classifiers.
- The VGG16 transfer learning approach reached up to 86% accuracy with the Neural Network classifier.
- The knowledge-based feature extraction method demonstrated superior performance, achieving up to 98% accuracy with Neural Network, Random Forest, and Multilayer Perceptron classifiers.
Conclusions:
- Knowledge-based feature extraction significantly outperforms deep learning methods (CNN, VGG16) in breast cancer diagnosis using the BreakHis dataset.
- The combination of knowledge-based features and classifiers like Neural Network, Random Forest, or Multilayer Perceptron offers a highly accurate approach for histopathology-based cancer detection.
- Further research into knowledge-based systems could lead to more robust and accurate computer-aided diagnosis tools for oncology.
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