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CCND1 Overexpression in Idiopathic Dilated Cardiomyopathy: A Promising Biomarker?
Khatereh Dehghani1, Agata Stanek2, Arash Bagherabadi3
1Department of Cardiology, Jahrom University of Medical Sciences, Jahrom 7414846199, Iran.
Insights
This study identified key genes, including VEGFA and CCND1, overexpressed in idiopathic dilated cardiomyopathy (IDCM) patients. These findings may help develop new biomarkers for this severe heart condition.
Area of Science:
- Cardiology
- Genetics
- Molecular Biology
Background:
- Cardiomyopathy is a heart muscle disorder leading to cardiac failure.
- Dilated cardiomyopathy (DCM) is prevalent and often fatal.
- Idiopathic DCM (IDCM) has an unknown cause, necessitating biomarker discovery.
Purpose of the Study:
- To analyze the gene network in idiopathic dilated cardiomyopathy (IDCM) patients.
- To identify potential disease biomarkers for IDCM.
- To investigate the differential expression of selected genes in IDCM.
Main Methods:
- Gene expression data from the GEO dataset were analyzed.
- Differentially expressed genes were identified and mapped using STRING and Cytoscape.
- RT-PCR was used to validate gene expression in IDCM patients and controls.
Main Results:
- The genes VEGFA, IGF1, STAT1, and CCND1 were significantly overexpressed in IDCM patients compared to controls.
- VEGFA and CCND1 showed the highest overexpression levels.
- APP, MYH10, and MYH11 expression did not differ significantly between groups.
Conclusions:
- Overexpression of VEGFA, IGF1, STAT1, and CCND1 may play a role in IDCM progression.
- These genes represent potential biomarkers for idiopathic dilated cardiomyopathy.
- Further research with larger cohorts and additional genes is recommended for robust validation.
Abstract:
Cardiomyopathy, a disorder of electrical or heart muscle function, represents a type of cardiac muscle failure and culminates in severe heart conditions. The prevalence of dilated cardiomyopathy (DCM) is higher than that of other types (hypertrophic cardiomyopathy and restrictive cardiomyopathy) and causes many deaths. Idiopathic dilated cardiomyopathy (IDCM) is a type of DCM with an unknown underlying cause. This study aims to analyze the gene network of IDCM patients to identify disease biomarkers. Data were first extracted from the Gene Expression Omnibus (GEO) dataset and normalized based on the RMA algorithm (Bioconductor package), and differentially expressed genes were identified. The gene network was mapped on the STRING website, and the data were transferred to Cytoscape software to determine the top 100 genes. In the following, several genes, including VEGFA, IGF1, APP, STAT1, CCND1, MYH10, and MYH11, were selected for clinical studies. Peripheral blood samples were taken from 14 identified IDCM patients and 14 controls. The RT-PCR results revealed no significant differences in the expression of the genes APP, MYH10, and MYH11 between the two groups. By contrast, the STAT1, IGF1, CCND1, and VEGFA genes were overexpressed in patients more than in controls. The highest expression was found for VEGFA, followed by CCND1 (p < 0.001). Overexpression of these genes may contribute to disease progression in patients with IDCM. However, more patients and genes need to be analyzed in order to achieve more robust results.
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