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Updated: Jul 25, 2025

Differentiation of a Human Neural Stem Cell Line on Three Dimensional Cultures, Analysis of MicroRNA and Putative Target Genes
Published on: April 12, 2015
Choline Regulates SOX4 through miR-129-5p and Modifies H3K27me3 in the Developing Cortex
Evan M Paules1, Jorge A Silva-Gomez1, Walter B Friday1
1Department of Nutrition, Gillings School of Global Public Health, University of North Carolina at Chapel Hill, Chapel Hill, NC 27514, USA.
Choline availability impacts brain development by regulating neural progenitor cells. Low choline intake reduces SOX4 protein via miR-129-5p, affecting cell proliferation and differentiation.
Area of Science:
- Neuroscience
- Developmental Biology
- Molecular Biology
Background:
- Choline is crucial for neural progenitor cell (NPC) proliferation and differentiation in the developing cerebral cortex.
- The precise molecular mechanisms by which choline availability influences these processes remain incompletely understood.
Purpose of the Study:
- To elucidate the molecular pathway through which choline availability regulates NPCs in the developing brain.
- To identify key molecular players, including transcription factors and microRNAs, involved in choline-dependent neurogenesis.
Main Methods:
- Investigated the effect of choline availability on SOX4 protein levels in NPCs.
- Analyzed the role of microRNA-129-5p (miR-129-5p) in regulating SOX4 expression.
- Performed gain-of-function and loss-of-function assays for miR-129-5p.
- Assessed global H3K27me3 levels in the developing cortex.
Main Results:
- Low choline intake during neurogenesis reduces SOX4 protein levels in NPCs.
- This reduction is mediated by aberrant expression of miR-129-5p, not increased degradation.
- Decreased SOX4 and EZH2 (a downstream target) led to reduced H3K27me3, impacting NPC proliferation and differentiation.
Conclusions:
- Choline availability regulates the transcription factor SOX4 in NPCs through miR-129-5p.
- This nutrient-mediated pathway influences epigenetic modifications (H3K27me3) and critical developmental processes like cell proliferation and differentiation.
- Presents a novel mechanism for nutrient regulation of gene expression in brain development.
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