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Selecting High-Performing and Stable Pea Genotypes in Multi-Environmental Trial (MET): Applying AMMI, GGE-Biplot, and
Sintayehu D Daba1, Alecia M Kiszonas1, Rebecca J McGee2
1USDA-ARS Western Wheat & Pulse Quality Laboratory, Pullman, WA 99164, USA.
Plants (Basel, Switzerland)
|June 28, 2023
Summary
BLUP models offer superior predictive accuracy for pea breeding, but AMMI and GGE tools are essential for identifying genotypes with broad adaptability across diverse environments. This research aids breeders in variety selection and enhances pea production strategies.
Area of Science:
- Agricultural Science
- Plant Breeding
- Genetics
Background:
- Crop breeding programs generate extensive trait data valuable for optimizing improvement pipelines.
- Advanced yield trials (AYT) provide crucial data for assessing genotype performance.
Purpose of the Study:
- To analyze and test key aspects of pea breeding using ten years of advanced yield trial data.
- To evaluate the predictive success of Best Linear Unbiased Prediction (BLUP) and AMMI (Additive Main effects and Multiplicative Interaction) models.
- To identify statistical tools for understanding genotype-environment interactions (GE) and selecting adaptable pea varieties.
Main Methods:
- Leveraged ten years (2012-2021) of AYT data for green, yellow, and winter peas.
- Utilized six balanced datasets to compare BLUP and AMMI family models via cross-validation.
- Employed AMMI and GGE (Genotype + GE interaction) biplots to analyze GE interactions and genotype adaptability.
Main Results:
- BLUP models demonstrated higher predictive accuracy than AMMI models.
- AMMI and GGE biplots effectively identified genotypes with specific or broad adaptability.
- Significant yield reductions (80-87%) were observed in unfavorable environments, linked to weather variability (heat, low precipitation).
Conclusions:
- BLUP is accurate for prediction, but AMMI/GGE are vital for selecting broadly adapted genotypes.
- Understanding GE interactions is crucial for optimizing pea variety selection.
- Environmental factors, particularly weather, significantly impact pea seed yield variability.
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