Determination of hyper-parameters in the atomic descriptors for efficient and robust molecular dynamics simulations
Jianbo Lin1, Ryo Tamura1,2, Yasunori Futamura3,4,5
1Center for Basic Research on Materials, National Institute for Materials Science, Tsukuba 305-0044, Japan. lin.janbo@nims.go.jp.
Physical Chemistry Chemical Physics : PCCP
|June 28, 2023
Summary
This study introduces a method to automatically optimize atomic descriptors for machine learning force prediction. It enables accurate and robust simulations using fewer descriptors, enhancing efficiency.
Area of Science:
- Materials Science
- Computational Chemistry
- Machine Learning
Background:
- Atomic descriptors are crucial for machine learning (ML) force prediction in materials science.
- High-dimensional descriptors can lead to overfitting and reduced transferability.
- Efficient and robust ML models require optimized descriptor sets.
Purpose of the Study:
- To develop a method for automatic hyperparameter determination in atomic descriptors.
- To achieve accurate ML force predictions with a reduced number of descriptors.
- To enhance the robustness and transferability of ML models for molecular dynamics.
Main Methods:
- Proposing a novel method to automatically determine hyperparameters for atomic descriptors.
- Focusing on identifying an optimal variance threshold for descriptor components.
- Utilizing both two-body and novel split-type three-body descriptors.
Main Results:
- Demonstrated effectiveness across crystalline, liquid, and amorphous SiO2, SiGe, and Si systems.
- Achieved accurate machine learning forces with a reduced descriptor set.
- Enabled efficient and robust molecular dynamics simulations.
Conclusions:
- The proposed method effectively optimizes atomic descriptors for ML force prediction.
- Reduced descriptor sets lead to more efficient and transferable ML models.
- This approach facilitates robust molecular dynamics simulations in materials science.
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