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Machine Learning in Environmental Research: Common Pitfalls and Best Practices.

Jun-Jie Zhu1, Meiqi Yang1, Zhiyong Jason Ren1

  • 1Department of Civil and Environmental Engineering and Andlinger Center for Energy and the Environment, Princeton University, Princeton, New Jersey 08544, United States.

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Summary

This study provides best practice guidelines for environmental machine learning (ML) research, highlighting common pitfalls and offering solutions. It aims to improve the accuracy and reliability of ML applications in environmental science.

Keywords:
Machine learningcausalitydata leakagedata preprocessingenvironmental researchhyperparameter optimizationmodel explainabilitysupervised learning

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Area of Science:

  • Environmental Science
  • Data Science
  • Computational Science

Background:

  • Machine learning (ML) is widely adopted in environmental research for analyzing large datasets and complex variable relationships.
  • Inadequate ML studies, stemming from unfamiliarity and lack of methodological rigor, can lead to erroneous conclusions in environmental science.

Purpose of the Study:

  • To synthesize literature analysis and expert experience into a tutorial-like guide for environmental ML research.
  • To identify and address common pitfalls in ML application within environmental studies.
  • To provide best practice guidelines for rigorous data preprocessing and model development in environmental ML.

Main Methods:

  • Literature analysis of 148 highly cited environmental ML research articles.
  • Identification of over 30 key pitfalls and misconceptions.
  • Evidence-based data analysis focusing on terminology, sample/feature size, data enrichment, feature selection, randomness assessment, data leakage, data splitting, method selection, model optimization, evaluation, explainability, and causality.

Main Results:

  • Identified and categorized common misconceptions and pitfalls in environmental ML research.
  • Provided evidence-based analysis and best practice recommendations for over 30 critical items.
  • Illustrated good examples of supervised learning and reference modeling paradigms.

Conclusions:

  • Researchers need to adopt more rigorous standards in data preprocessing and model development for environmental ML.
  • Adherence to best practices ensures more accurate, robust, and practicable ML models in environmental research and applications.
  • This guide aims to enhance the quality and reliability of ML studies in environmental science.